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Pldi Gene Detail
Summary
  • Symbol
    Pldi
  • Name
    polymorphic derived intron containing
  • Synonyms
    1700125F08Rik, Poldi
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1920866
    NCBI Gene: 73616
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:60928226-60938132 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 32.01 cM, cytoband B4
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    27 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920866
lncRNA gene Chr10:60928226-60938132 (-)
129S1/SvImJ MGP_129S1SvImJ_G0005119
lincRNA gene Chr10:60211290-60222366 (-)
A/J MGP_AJ_G0005102
lincRNA gene Chr10:58423571-58433467 (-)
AKR/J MGP_AKRJ_G0005080
lincRNA gene Chr10:59949347-59959248 (-)
BALB/cJ MGP_BALBcJ_G0005083
lincRNA gene Chr10:58504544-58514493 (-)
C3H/HeJ MGP_C3HHeJ_G0005032
lincRNA gene Chr10:59850377-59860919 (-)
C57BL/6NJ MGP_C57BL6NJ_G0005233
lincRNA gene Chr10:62346585-62357745 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0004639
lincRNA gene Chr10:55411902-55421856 (-)
CAST/EiJ MGP_CASTEiJ_G0004979
lincRNA gene Chr10:59831178-59841018 (-)
CBA/J MGP_CBAJ_G0005022
lincRNA gene Chr10:64642524-64655199 (-)
DBA/2J MGP_DBA2J_G0005041
lincRNA gene Chr10:57710695-57720756 (-)
FVB/NJ MGP_FVBNJ_G0005063
lincRNA gene Chr10:56964593-56974881 (-)
LP/J MGP_LPJ_G0005120
lincRNA gene Chr10:60615930-60626987 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0005046
lincRNA gene Chr10:67038772-67049392 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0005240
lincRNA gene Chr10:59752442-59763253 (-)
PWK/PhJ MGP_PWKPhJ_G0004930
lincRNA gene Chr10:57534344-57544797 (-)
SPRET/EiJ MGP_SPRETEiJ_G0004855
lincRNA gene Chr10:59086285-59097044 (-)
WSB/EiJ MGP_WSBEiJ_G0005026
lincRNA gene Chr10:59681293-59690976 (-)



Homology
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Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele exhibit reduced testis weight and decreased sperm motility.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Expression
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  • cDNA Data
Interactions
less
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 73616 NCBI Gene Model | MGI Sequence Detail 9907 C57BL/6J ±  kb
transcript NR_033616 RefSeq | MGI Sequence Detail 853 C57BL/6  
polypeptide Q9D980 UniProt | EBI | MGI Sequence Detail 128 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    1 Sequence
Molecular
Reagents
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  • All nucleic 4
    cDNA 4

    Microarray probesets 2
References
more
  • Summaries
    All 21
    Gene Ontology 1
    Phenotypes 7
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:154651 Heinen TJ, et al., Emergence of a new gene from an intergenic region. Curr Biol. 2009 Sep 29;19(18):1527-31

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory