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Pldi
Gene Detail
Symbol

Name
ID
Pldi
polymorphic derived intron containing
MGI:1920866
Synonyms
1700125F08Rik, Poldi
Feature Type
lincRNA gene
Genetic Map
Chromosome 10
32.01 cM, cytoband B4
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr10:60928226-60938132 bp, - strand
From VEGA annotation of GRCm38

  9907 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
Gene Tree: Pldi
Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
 
Mice homozygous for a knock-out allele exhibit reduced testis weight and decreased sperm motility.
 
Interactions
Pldi interacts with 1 marker (Mir423)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process sperm motility
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(3)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(3) cDNA(3)
Microarray probesets(2)
Other database
links
VEGA Gene ModelOTTMUSG00000043406 (Evidence)
Ensembl Gene ModelENSMUSG00000037247 (Evidence)
Entrez Gene73616 (Evidence)
UniGene159038
DFCITC1592711
DoTSDT.55123753
NIA Mouse Gene IndexU031833
International Mouse Knockout Project StatusPldi
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000043406 VEGA Gene Model | MGI Sequence Detail 9907 C57BL/6J ±  kb
transcript OTTMUST00000113886 VEGA | MGI Sequence Detail 853 Not Applicable 
polypeptide Q9D980 UniProt | EBI | MGI Sequence Detail 128 Not Applicable 

For the selected sequences
All sequences(14) RefSeq(1) UniProt(2)
Polymorphisms
SNPs within 2kb(27 from dbSNP Build 137)
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:154651 Heinen TJ, et al., Emergence of a new gene from an intergenic region. Curr Biol. 2009 Sep 29;19(18):1527-31
All references(18)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory