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1700084J12Rik Pseudogene Detail
Summary
  • Symbol
    1700084J12Rik
  • Name
    RIKEN cDNA 1700084J12 gene
  • Feature Type
    pseudogene
  • IDs
    MGI:1920736
    NCBI Gene: 73486
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr15:33405209-33405939 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 13.74 cM, cytoband B3.3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    86 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920736
pseudogene Chr15:33403985-33405976 (-)
129S1/SvImJ MGP_129S1SvImJ_G0039670
pseudogene Chr15:31708654-31710641 (-)
A/J MGP_AJ_G0039667
pseudogene Chr15:30472715-30474706 (-)
AKR/J MGP_AKRJ_G0039593
pseudogene Chr15:31289315-31291297 (-)
BALB/cJ MGP_BALBcJ_G0039641
pseudogene Chr15:30482239-30484222 (-)
C3H/HeJ MGP_C3HHeJ_G0039303
pseudogene Chr15:31286676-31288622 (-)
C57BL/6NJ MGP_C57BL6NJ_G0040195
pseudogene Chr15:32933614-32936900 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0036838
pseudogene Chr15:28410164-28412108 (-)
CAST/EiJ MGP_CASTEiJ_G0038424
pseudogene Chr15:31709288-31711270 (-)
CBA/J MGP_CBAJ_G0039272
pseudogene Chr15:33893607-33895554 (-)
DBA/2J MGP_DBA2J_G0039464
pseudogene Chr15:30258163-30260110 (-)
FVB/NJ MGP_FVBNJ_G0039421
pseudogene Chr15:29745309-29747298 (-)
LP/J MGP_LPJ_G0039507
pseudogene Chr15:31618130-31620117 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0039425
pseudogene Chr15:36950507-36952491 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0040300
pseudogene Chr15:31490657-31492637 (-)
PWK/PhJ MGP_PWKPhJ_G0038098
pseudogene Chr15:30367409-30369394 (-)
SPRET/EiJ MGP_SPRETEiJ_G0037849
pseudogene Chr15:31221714-31223696 (-)
WSB/EiJ MGP_WSBEiJ_G0038656
pseudogene Chr15:31447194-31449179 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    2
  • Genomic Mutations
    2 involving 1700084J12Rik
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 73486 NCBI Gene Model | MGI Sequence Detail 731 C57BL/6J ±  kb
transcript NR_033608 RefSeq | MGI Sequence Detail 731 Not Specified  
polypeptide Q9D9F1 UniProt | EBI | MGI Sequence Detail 123 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR016082 Ribosomal protein L30, ferredoxin-like fold domain
    IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily
    IPR039699 Ribosomal protein L7/L30
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 2
References
more
  • Summaries
    All 16
    Phenotypes 5
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory