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1700084J12Rik Pseudogene Detail
Summary
  • Symbol
    1700084J12Rik
  • Name
    RIKEN cDNA 1700084J12 gene
  • Feature Type
    pseudogene
  • IDs
    MGI:1920736
    NCBI Gene: 73486
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr15:33405355-33406085 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 13.74 cM, cytoband B3.3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    64 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920736
pseudogene Chr15:33404131-33406122 (-)
129S1/SvImJ MGP_129S1SvImJ_G0039670
pseudogene Chr15:31708654-31710641 (-)
A/J MGP_AJ_G0039667
pseudogene Chr15:30472715-30474706 (-)
AKR/J MGP_AKRJ_G0039593
pseudogene Chr15:31289315-31291297 (-)
BALB/cJ MGP_BALBcJ_G0039641
pseudogene Chr15:30482239-30484222 (-)
C3H/HeJ MGP_C3HHeJ_G0039303
pseudogene Chr15:31286676-31288622 (-)
C57BL/6NJ MGP_C57BL6NJ_G0040195
pseudogene Chr15:32933614-32936900 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0036838
pseudogene Chr15:28410164-28412108 (-)
CAST/EiJ MGP_CASTEiJ_G0038424
pseudogene Chr15:31709288-31711270 (-)
CBA/J MGP_CBAJ_G0039272
pseudogene Chr15:33893607-33895554 (-)
DBA/2J MGP_DBA2J_G0039464
pseudogene Chr15:30258163-30260110 (-)
FVB/NJ MGP_FVBNJ_G0039421
pseudogene Chr15:29745309-29747298 (-)
LP/J MGP_LPJ_G0039507
pseudogene Chr15:31618130-31620117 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0039425
pseudogene Chr15:36950507-36952491 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0040300
pseudogene Chr15:31490657-31492637 (-)
PWK/PhJ MGP_PWKPhJ_G0038098
pseudogene Chr15:30367409-30369394 (-)
SPRET/EiJ MGP_SPRETEiJ_G0037849
pseudogene Chr15:31221714-31223696 (-)
WSB/EiJ MGP_WSBEiJ_G0038656
pseudogene Chr15:31447194-31449179 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    2
  • Genomic Mutations
    2 involving 1700084J12Rik
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 73486 NCBI Gene Model | MGI Sequence Detail 731 C57BL/6J ±  kb
transcript NR_033608 RefSeq | MGI Sequence Detail 731 Not Specified  
polypeptide Q9D9F1 UniProt | EBI | MGI Sequence Detail 123 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR016082 Ribosomal protein L30, ferredoxin-like fold domain
    IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily
    IPR039699 Ribosomal protein L7/L30
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 2
References
more
  • Summaries
    All 16
    Phenotypes 5
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/12/2021
MGI 6.17
The Jackson Laboratory