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1700061I17Rik Gene Detail
Summary
  • Symbol
    1700061I17Rik
  • Name
    RIKEN cDNA 1700061I17 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1920612
    NCBI Gene: 433646
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:117060522-117077765 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 50.51 cM, cytoband G2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    346 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920612
lncRNA gene Chr3:117060522-117077765 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006285
lincRNA gene Chr3:119026499-119047593 (-)
A/J MGP_AJ_G0006278
lincRNA gene Chr3:115110608-115127202 (-)
AKR/J MGP_AKRJ_G0006254
lincRNA gene Chr3:118004989-118031764 (-)
BALB/cJ MGP_BALBcJ_G0006252
lincRNA gene Chr3:114952226-114968804 (-)
C3H/HeJ MGP_C3HHeJ_G0006204
lincRNA gene Chr3:118405310-118421898 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006417
lincRNA gene Chr3:123379447-123397500 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005713
lincRNA gene Chr3:110761251-110778292 (-)
CAST/EiJ MGP_CASTEiJ_G0006137
lincRNA gene Chr3:117668852-117689489 (-)
CBA/J MGP_CBAJ_G0006187
lincRNA gene Chr3:127603572-127620168 (-)
DBA/2J MGP_DBA2J_G0006209
lincRNA gene Chr3:114327510-114345376 (-)
FVB/NJ MGP_FVBNJ_G0006230
lincRNA gene Chr3:111957822-111975679 (-)
LP/J MGP_LPJ_G0006290
lincRNA gene Chr3:120541218-120563489 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006221
lincRNA gene Chr3:134964335-134982170 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006423
lincRNA gene Chr3:117558890-117581305 (-)
PWK/PhJ MGP_PWKPhJ_G0006076
lincRNA gene Chr3:113972111-113991795 (-)
SPRET/EiJ MGP_SPRETEiJ_G0005988
lincRNA gene Chr3:115574381-115593246 (-)
WSB/EiJ MGP_WSBEiJ_G0006185
lincRNA gene Chr3:118260892-118279631 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving 1700061I17Rik
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 433646 NCBI Gene Model | MGI Sequence Detail 17244 C57BL/6J ±  kb
transcript NR_038029 RefSeq | MGI Sequence Detail 1962 C57BL/6  
polypeptide Q9D9J4 UniProt | EBI | MGI Sequence Detail 126 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 3
References
more
  • Summaries
    All 18
    Diseases 1
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/13/2019
MGI 6.14
The Jackson Laboratory