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Lmntd2
Gene Detail
Symbol

Name
ID
Lmntd2
lamin tail domain containing 2
MGI:1919250
Synonyms
1600016N20Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 7
86.50 cM, cytoband F5
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr7:141210043-141214082 bp, - strand
From Ensembl annotation of GRCm38

  4040 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:104159  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 dog

Gene Tree: Lmntd2

Human
homologs
Human Homolog LMNTD2, lamin tail domain containing 2
NCBI Gene ID 256329
neXtProt AC  NX_Q8IXW0
Human Synonyms  C11orf35
Human Chr (Location)  11p15.5; chr11:554850-560779 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Gene trapped(1) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Lmntd2 interacts with 15 markers (Mir141, Mir218-1, Mir218-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process positive regulation of mRNA splicing, via spliceosome
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(5)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(5) cDNA(5)
Microarray probesets(2)
Other database
links
Ensembl Gene ModelENSMUSG00000025500 (Evidence)
Entrez Gene72000 (Evidence)
UniGene334314
DFCITC1607978
NIA Mouse Gene IndexU029448
Consensus CDS ProjectCCDS40181.1
International Mouse Knockout Project StatusLmntd2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000025500 Ensembl Gene Model | MGI Sequence Detail 4040 C57BL/6J ±  kb
transcript ENSMUST00000170841 Ensembl | MGI Sequence Detail 2079 Not Applicable 
polypeptide ENSMUSP00000130905 Ensembl | MGI Sequence Detail 674 Not Applicable 

For the selected sequences
All sequences(27) RefSeq(12) UniProt(3)
Polymorphisms
SNPs within 2kb(39 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001322 Lamin Tail Domain
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:204486 Zheng S, et al., A broadly applicable high-throughput screening strategy identifies new regulators of Dlg4 (Psd-95) alternative splicing. Genome Res. 2013 Jun;23(6):998-1007
All references(22)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory