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R3hcc1
Gene Detail
 Symbol
Name
ID
R3hcc1
R3H domain and coiled-coil containing 1
MGI:1919093
Synonyms 1700020M16Rik
Feature Type protein coding gene
Genetic Map
Chromosome 14
36.08 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr14:69697307-69707584 bp, - strand
From VEGA annotation of GRCm38

  10278 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:136250  Vertebrate Homology Class
1 mouse; 1 rat

Gene Tree: R3hcc1

Alleles
and
phenotypes
All alleles(4) : Gene trapped(4)
Incidental mutations (data from APF )
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process biological_process
Component cellular_component
Function nucleic acid binding, nucleotide binding
External Resources: FuncBase
Expression
cDNA source data(48)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(48) cDNA(48)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000029904 (Evidence)
Ensembl Gene ModelENSMUSG00000034194 (Evidence)
Entrez Gene71843 (Evidence)
UniGene27738
DFCITC1598238, TC1680805
DoTSDT.530456, DT.94153732, DT.97355321
NIA Mouse Gene IndexU035735
Consensus CDS ProjectCCDS49533.1
International Mouse Knockout Project StatusR3hcc1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000029904 VEGA Gene Model | MGI Sequence Detail 10278 C57BL/6J ±  kb
transcript OTTMUST00000074192 VEGA | MGI Sequence Detail 1726 Not Applicable 
polypeptide OTTMUSP00000038528 VEGA | MGI Sequence Detail 302 Not Applicable 

For the selected sequences
All sequences(43) RefSeq(5) UniProt(2)
Polymorphisms SNPs within 2kb(115 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR012677 Nucleotide-binding, alpha-beta plait
InterPro IPR001374 Single-stranded nucleic acid binding R3H
Protein Ontology PR:000030868 R3H and coiled-coil domain-containing protein 1
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(31)
Other
accession IDs
MGI:1353600

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory