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R3hdm2 Gene Detail
Summary
  • Symbol
    R3hdm2
  • Name
    R3H domain containing 2
  • Synonyms
    1300003K24Rik, mKIAA1002
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919000
    NCBI Gene: 71750
Location & Maps
more
  • Sequence Map
    Chr10:127380327-127499384 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      119058 bp   ±  kb flank

  • Genome Browsers
Homology
more
  • Human Ortholog
    R3HDM2, R3H domain containing 2
  • Vertebrate Orthologs
    10
  • Human Ortholog
    R3HDM2, R3H domain containing 2
    Orthology source: HGNC, HomoloGene
  • Synonyms
    CAG6, PR01365
  • Links
    NCBI Gene ID: 22864
    neXtProt AC: NX_Q9Y2K5

  • Chr Location
    12q13.3; chr12:57253764-57431000 (-)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 8954
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 western clawed frog;1 zebrafish
  • HCOP
    human homology predictions: R3HDM2
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000035856 VEGA Gene Model | MGI Sequence Detail 119058 C57BL/6J ±  kb
transcript OTTMUST00000091866 VEGA | MGI Sequence Detail 4281 Not Applicable  
polypeptide OTTMUSP00000050650 VEGA | MGI Sequence Detail 1044 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    542 from dbSNP Build 137
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 112
    cDNA 112

    Microarray probesets 4
Other
Accession IDs
less
MGI:2143757
References
more
  • Summaries
    All 30
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 7
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
01/26/2016
MGI 6.02
The Jackson Laboratory