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Hsfy2
Gene Detail
Symbol

Name
ID
Hsfy2
heat shock transcription factor, Y linked 2
MGI:1918316
Synonyms
4933413G11Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 1
28.72 cM, cytoband C1
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr1:56636044-56637435 bp, - strand
From VEGA annotation of GRCm38

  1392 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:134090  Vertebrate Homology Class
2 human; 1 mouse; 1 rat; 1 cattle; 2 chicken

HCOP human homology predictions: HSFY1, HSFY2
Gene Tree: Hsfy2

Human
homologs
HSFY1, heat shock transcription factor, Y-linked 1
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 86614
neXtProt AC: NX_Q96LI6

Human Synonyms: HSF2L, HSFY

Human Chr (Location): Yq11.222; chrY:18546685-18588963 (+)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human HSFY1

  1 More Homolog(s):
Mutations,
alleles, and
phenotypes
All mutations/alleles(1) : Targeted(1)
Interactions
Hsfy2 interacts with 73 markers (Mir18, Mir18b, Mir19a, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (94)    Tissues (94)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 94
cDNA source data(9)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(9) cDNA(9)
Microarray probesets(2)
Other database
links
VEGA Gene Model OTTMUSG00000047042 (Evidence)
Ensembl Gene Model ENSMUSG00000045336 (Evidence)
Entrez Gene 71066 (Evidence)
UniGene 152656
DFCI TC1588428
DoTS DT.55279185
NIA Mouse Gene Index U021345
Consensus CDS Project CCDS14964.1
International Mouse Phenotyping Consortium Status Hsfy2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000047042 VEGA Gene Model | MGI Sequence Detail 1392 C57BL/6J ±  kb
transcript OTTMUST00000121820 VEGA | MGI Sequence Detail 1392 Not Applicable 
polypeptide OTTMUSP00000067015 VEGA | MGI Sequence Detail 392 Not Applicable 

For the selected sequences
All sequences(17) RefSeq(2) UniProt(2)
Polymorphisms
SNPs within 2kb(37 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000232 Heat shock factor (HSF)-type, DNA-binding
InterPro IPR027725 Heat shock transcription factor family
InterPro IPR027721 Heat shock transcription factor, Y-linked
InterPro IPR011991 Winged helix-turn-helix DNA-binding domain
Protein Ontology PR:000008796 heat shock transcription factor, Y-linked
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
All references(24)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/25/2015
MGI 6.0
The Jackson Laboratory