About   Help   FAQ
Hsfy2
Gene Detail
 Symbol
Name
ID
Hsfy2
heat shock transcription factor, Y linked 2
MGI:1918316
Synonyms 4933413G11Rik
Feature Type protein coding gene
Genetic Map
Chromosome 1
28.72 cM, cytoband C1
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr1:56636044-56637435 bp, - strand
From VEGA annotation of GRCm38

  1392 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:134090  Vertebrate Homology Class
2 human; 1 mouse; 1 rat; 1 cattle; 2 chicken

Gene Tree: Hsfy2

Human
homologs
Human Homolog HSFY1, heat shock transcription factor, Y-linked 1
NCBI Gene ID 86614
neXtProt AC  NX_Q96LI6
Human Synonyms  HSF2L, HSFY
Human Chr (Location)  Yq11.222; chrY:18546688-18588963 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human HSFY1
Human Homolog HSFY2, heat shock transcription factor, Y linked 2
NCBI Gene ID 159119
neXtProt AC  NX_Q96LI6
Human Synonyms  HSF2L, HSFY
Human Chr (Location)  Yq11.222; chrY:18731440-18773735 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(1) : Targeted(1)
Interactions
Hsfy2 interacts with 73 markers (Mir18, Mir18b, Mir19a, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process response to stress
Component nucleus
Function DNA binding
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (94)    Tissues (94)   
Theiler Stages: 22
Assay TypeResults
RNA in situ 94
cDNA source data(9)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(9) cDNA(9)
Microarray probesets(2)
Other database
links
VEGA Gene ModelOTTMUSG00000047042 (Evidence)
Ensembl Gene ModelENSMUSG00000045336 (Evidence)
Entrez Gene71066 (Evidence)
UniGene152656
DFCITC1588428
DoTSDT.55279185
NIA Mouse Gene IndexU021345
Consensus CDS ProjectCCDS14964.1
International Mouse Knockout Project StatusHsfy2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000047042 VEGA Gene Model | MGI Sequence Detail 1392 C57BL/6J ±  kb
transcript OTTMUST00000121820 VEGA | MGI Sequence Detail 1392 Not Applicable 
polypeptide OTTMUSP00000067015 VEGA | MGI Sequence Detail 392 Not Applicable 

For the selected sequences
All sequences(17) RefSeq(2) UniProt(2)
Polymorphisms SNPs within 2kb(37 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000232 Heat shock factor (HSF)-type, DNA-binding
InterPro IPR011991 Winged helix-turn-helix DNA-binding domain
Protein Ontology PR:000008796 heat shock transcription factor, Y-linked
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
All references(26)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
08/19/2014
MGI 5.19
The Jackson Laboratory