Vcpip1
Gene Detail

Symbol Name ID

Vcpip1 valosin containing protein (p97)/p47 complex interacting protein 1 MGI:1917925

Synonyms

5730421J18Rik, 5730538E15Rik, mKIAA1850, Vcip135

Feature Type

protein coding gene

Genetic Map

Chromosome 1

2.08 cM, cytoband A2
Detailed Genetic Map ± 1 cM


Mapping data(2)

Sequence Map

Chr1:9718622-9748382 bp, - strand From VEGA annotation of GRCm38   29761 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:11814  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Vcpip1

Human homologs

Human Homolog		VCPIP1, valosin containing protein (p97)/p47 complex interacting protein 1
NCBI Gene ID		80124
neXtProt AC		NX_Q96JH7
Human Synonyms		DUBA3, VCIP135
Human Chr (Location)		8q13; chr8:67542488-67579452 (-)  GRCh37.p10

Alleles and phenotypes

All alleles(2) : Gene trapped(2)

Gene Ontology (GO) classifications

All GO classifications: (13 annotations)

Process	endoplasmic reticulum membrane fusion, Golgi organization, ...
Component	cytoplasm, endoplasmic reticulum, ...
Function	cysteine-type peptidase activity, hydrolase activity, ...

External Resources: FuncBase

Expression

cDNA source data(12)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(12) cDNA(12)
Microarray probesets(7)

Other database links

VEGA Gene Model	OTTMUSG00000022113 (Evidence)
Ensembl Gene Model	ENSMUSG00000045210 (Evidence)
Entrez Gene	70675 (Evidence)
DFCI	TC1576527, TC1597161, TC1619196, TC1763096
NIA Mouse Gene Index	U021112
EC	3.4.22.-
Consensus CDS Project	CCDS14814.1
International Mouse Knockout Project Status	Vcpip1

Sequences

Length	Strain/Species
genomic	OTTMUSG00000022113	VEGA Gene Model | MGI Sequence Detail	29761	C57BL/6J
transcript	OTTMUST00000052491	VEGA | MGI Sequence Detail	9749	Not Applicable
polypeptide	OTTMUSP00000024897	VEGA | MGI Sequence Detail	1220	Not Applicable

All sequences(36) RefSeq(2) UniProt(4)

Polymorphisms

SNPs(50 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR003323	Ovarian tumour, otubain
Protein Ontology	PR:000017274	deubiquitinating protein VCIP135

References

(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:175602 Totsukawa G, et al., VCIP135 deubiquitinase and its binding protein, WAC, in p97ATPase-mediated membrane fusion. EMBO J. 2011;30(17):3581-93
All references(30)

Other accession IDs

MGI:1917792