About   Help   FAQ
Copb1 Gene Detail
Summary
  • Symbol
    Copb1
  • Name
    coatomer protein complex, subunit beta 1
  • Synonyms
    2610019B04Rik, Copb1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917599
    NCBI Gene: 70349
  • Gene Overview
    MyGene.info: COPB1
Location & Maps
more
  • Sequence Map
    Chr7:114215559-114254680 bp, - strand
  • From NCBI annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      39122 bp   ±  kb flank

  • Genome Browsers
Homology
more
  • Human Ortholog
    COPB1, coatomer protein complex subunit beta 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    COPB1, coatomer protein complex subunit beta 1
    Orthology source: HGNC, HomoloGene
  • Synonyms
    COPB
  • Links
    NCBI Gene ID: 1315
    neXtProt AC: NX_P53618

  • Chr Location
    11p15.2; chr11:14457503-14499895 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
  • All Mutations and Alleles
    7
  • Gene trapped
    4
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    1 involving Copb1
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 70349 NCBI Gene Model | MGI Sequence Detail 39122 C57BL/6J ±  kb
transcript NM_033370 RefSeq | MGI Sequence Detail 3315 C57BL/6  
polypeptide Q9JIF7 UniProt | EBI | MGI Sequence Detail 953 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    334 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 190
    cDNA 189
    Primer pair 1

    Microarray probesets 3
References
more
  • Summaries
    All 34
    Developmental Gene Expression 1
    Gene Ontology 9
    Phenotypes 10
  • Earliest
    J:42235 Hosaka M, et al., Structure and intracellular localization of mouse ADP-ribosylation factors type 1 to type 6 (ARF1-ARF6). J Biochem. 1996 Oct;120(4):813-9
  • Latest
    J:198864 Peterson TA, et al., ARF1-regulated coatomer directs the steady-state localization of protein kinase C epsilon at the Golgi apparatus. Biochim Biophys Acta. 2013 Mar;1833(3):487-93

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
05/17/2016
MGI 6.03
The Jackson Laboratory