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H1fnt
Gene Detail
Symbol

Name
ID
H1fnt
H1 histone family, member N, testis-specific
MGI:1917319
Synonyms
1700026P10Rik, H1T2
Feature Type
protein coding gene
Genetic Map
Chromosome 15
54.26 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr15:98255982-98257307 bp, - strand
From NCBI annotation of GRCm38

  1326 bp   ±  kb flank

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Mouse Genome Browser
Vertebrate
homology
Gene Tree: H1fnt
Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Radiation induced(1) Targeted(4)
Genomic Mutations involving H1fnt (1)
Incidental mutations (data from Mutagenetix , APF )
 
Homozygous null male mice display reduced fertility with asthenozoospermia, oligozoospermia, and teratozoospermia.
 
Interactions
H1fnt interacts with 18 markers (Mir125a, Mir125b-1, Mir125b-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (13 annotations)
Process cell differentiation, chromosome condensation, ...
Component chromosome, nuclear chromatin, ...
Function ATP binding, DNA binding, ...
External Resources: FuncBase
Expression
cDNA source data(13)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(13) cDNA(13)
Microarray probesets(4)
Other database
links
Ensembl Gene ModelENSMUSG00000048077 (Evidence)
Entrez Gene70069 (Evidence)
UniGene107718
DFCITC1583992
DoTSDT.99760163
Consensus CDS ProjectCCDS49721.1
International Mouse Knockout Project StatusH1fnt
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 70069 NCBI Gene Model | MGI Sequence Detail 1326 C57BL/6J ±  kb
transcript NM_027304 RefSeq | MGI Sequence Detail 1338 C57BL/6 
polypeptide Q8CJI4 UniProt | EBI | MGI Sequence Detail 398 Not Applicable 

For the selected sequences
All sequences(16) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(25 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
Protein Ontology PR:000008406 testis-specific H1 histone
Graphical View of Protein Domain Structure
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:139579 Turner LM, et al., Comparative analysis of testis protein evolution in rodents. Genetics. 2008 Aug;179(4):2075-89
All references(24)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/11/2014
MGI 5.20
The Jackson Laboratory