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Nt5dc2 Gene Detail
Summary
  • Symbol
    Nt5dc2
  • Name
    5'-nucleotidase domain containing 2
  • Synonyms
    2510015F01Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917271
    NCBI Gene: 70021
Location & Maps
more
  • Sequence Map
    Chr14:31134853-31139121 bp, + strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser
  • Download
    Sequence
      4269 bp   ±  kb flank

  • Genome Browsers
    VEGA | Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 19.09 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    NT5DC2, 5'-nucleotidase domain containing 2
  • Vertebrate Orthologs
    9
  • Human Ortholog
    NT5DC2, 5'-nucleotidase domain containing 2
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 64943
    neXtProt AC: NX_Q9H857

  • Chr Location
    3p21.1; chr3:52524369-52535077 (-)  GRCh38.p2
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    5
  • Gene trapped
    3
  • Targeted
    2
  • Incidental Mutations
    CvDC
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    142
  • Tissues
    21
  • cDNA Data
    96
  • Literature Summary
    2
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000071547 Ensembl Gene Model | MGI Sequence Detail 4269 C57BL/6J ±  kb
transcript ENSMUST00000090212 Ensembl | MGI Sequence Detail 1407 Not Applicable  
polypeptide ENSMUSP00000087680 Ensembl | MGI Sequence Detail 390 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    14 from dbSNP Build 142
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR023214 HAD-like domain
    IPR008380 HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase
    IPR016695 Purine 5'-nucleotidase
Molecular
Reagents
less
  • All nucleic 97
    cDNA 96
    Primer pair 1

    Microarray probesets 3
References
more
  • Summaries
    All 24
    Developmental Gene Expression 2
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/20/2016
MGI 6.05 		The Jackson Laboratory