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1600002K03Rik
Gene Detail
Symbol

Name
ID
1600002K03Rik
RIKEN cDNA 1600002K03 gene
MGI:1917020
Feature Type
protein coding gene
Genetic Map
Chromosome 10
39.72 cM, cytoband C1
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr10:80172944-80175146 bp, + strand
From VEGA annotation of GRCm38

  2203 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:78582  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle

HCOP human homology predictions: C19orf24
Gene Tree: 1600002K03Rik

Human
homologs
C19orf24, chromosome 19 open reading frame 24
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 55009
neXtProt AC: NX_Q9BVV8

Human Chr (Location): 19p13.3; chr19:1275521-1279244 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(8) : Gene trapped(7) Targeted(1)
Interactions
1600002K03Rik interacts with 66 markers (Mir15a, Mir15b, Mir16-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process biological_process
Component cytoplasm, extracellular region, ...
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(17)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(17) cDNA(17)
Microarray probesets(2)
Other database
links
VEGA Gene Model OTTMUSG00000019106 (Evidence)
Ensembl Gene Model ENSMUSG00000035595 (Evidence)
Entrez Gene 69770 (Evidence)
UniGene 302754
DFCI TC1584196
DoTS DT.484651
NIA Mouse Gene Index U011742
Consensus CDS Project CCDS24012.1
International Mouse Phenotyping Consortium Status 1600002K03Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000019106 VEGA Gene Model | MGI Sequence Detail 2203 C57BL/6J ±  kb
transcript OTTMUST00000045734 VEGA | MGI Sequence Detail 678 Not Applicable 
polypeptide OTTMUSP00000020596 VEGA | MGI Sequence Detail 108 Not Applicable 

For the selected sequences
All sequences(19) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(1 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR009565 Protein of unknown function DUF1180
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(27)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/23/2015
MGI 5.22
The Jackson Laboratory