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Ms4a20 Gene Detail
Summary
  • Symbol
    Ms4a20
  • Name
    membrane-spanning 4-domains, subfamily A, member 20
  • Synonyms
    1700017D01Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916619
    NCBI Gene: 69369
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:11074178-11108240 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, 7.68 cM, cytoband B
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    109 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916619
 protein coding gene Chr19:11074178-11108253 (-)
129S1/SvImJ MGP_129S1SvImJ_G0024869
 protein coding gene Chr19:8481408-8520571 (-)
A/J MGP_AJ_G0024837
 protein coding gene Chr19:7923580-7960417 (-)
AKR/J MGP_AKRJ_G0024812
 protein coding gene Chr19:8224053-8260405 (-)
BALB/cJ MGP_BALBcJ_G0024837
 protein coding gene Chr19:7960759-7996680 (-)
C3H/HeJ MGP_C3HHeJ_G0024603
 protein coding gene Chr19:8107487-8142279 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025285
 protein coding gene Chr19:8872303-8910859 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0022712
 protein coding gene Chr19:8343743-8374289 (-)
CAST/EiJ MGP_CASTEiJ_G0024076
 protein coding gene Chr19:7753919-7787584 (-)
CBA/J MGP_CBAJ_G0024577
 protein coding gene Chr19:8919649-8954615 (-)
DBA/2J MGP_DBA2J_G0024704
 protein coding gene Chr19:7914605-7951670 (-)
FVB/NJ MGP_FVBNJ_G0024671
 protein coding gene Chr19:7962679-7991687 (-)
LP/J MGP_LPJ_G0024791
 protein coding gene Chr19:8436667-8470137 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0024698
 protein coding gene Chr19:8801033-8836457 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025333
 protein coding gene Chr19:8247447-8283893 (-)
PWK/PhJ MGP_PWKPhJ_G0023821
 protein coding gene Chr19:7373377-7413129 (-)
SPRET/EiJ MGP_SPRETEiJ_G0023626
 protein coding gene Chr19:7441115-7491601 (-)
WSB/EiJ MGP_WSBEiJ_G0024138
 protein coding gene Chr19:8136614-8170899 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    7
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000024729 Ensembl Gene Model | MGI Sequence Detail 34063 C57BL/6J ±  kb
transcript ENSMUST00000025635 Ensembl | MGI Sequence Detail 1192 Not Applicable  
polypeptide ENSMUSP00000025635 Ensembl | MGI Sequence Detail 209 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    9 Sequences
  • InterPro Domains
    IPR030417 Membrane-spanning 4-domains subfamily A
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 4
References
more
  • Summaries
    All 20
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory