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1810030O07Rik
Gene Detail
Symbol

Name
ID
1810030O07Rik
RIKEN cDNA 1810030O07 gene
MGI:1916405
Feature Type
protein coding gene
Genetic Map
Chromosome X
7.50 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
ChrX:12654879-12673668 bp, - strand
From VEGA annotation of GRCm38

  18790 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:17013  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 rhesus macaque; 1 cattle; 1 dog; 1 western clawed frog

HCOP human homology predictions: CXorf38
Gene Tree: 1810030O07Rik

Human
homologs
CXorf38, chromosome X open reading frame 38
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 159013
neXtProt AC: NX_Q8TB03

Human Chr (Location): Xp11.4; chrX:40626921-40647567 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Incidental mutations (data from APF , CvDC )
Interactions
1810030O07Rik interacts with 233 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(13)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(14) cDNA(14)
Microarray probesets(6)
Other database
links
VEGA Gene Model OTTMUSG00000016970 (Evidence)
Ensembl Gene Model ENSMUSG00000044148 (Evidence)
Entrez Gene 69155 (Evidence)
DFCI TC1720253, TC1619725, TC1576693
DoTS DT.110673753, DT.101181302, DT.50316783, DT.91388878
Consensus CDS Project CCDS30024.1
International Mouse Phenotyping Consortium Status 1810030O07Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000016970 VEGA Gene Model | MGI Sequence Detail 18790 C57BL/6J ±  kb
transcript OTTMUST00000041146 VEGA | MGI Sequence Detail 2699 Not Applicable 
polypeptide OTTMUSP00000018433 VEGA | MGI Sequence Detail 320 Not Applicable 

For the selected sequences
All sequences(47) RefSeq(6) UniProt(2)
Polymorphisms
SNPs within 2kb(79 from dbSNP Build 137)
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(21)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory