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Ydjc
Gene Detail
 Symbol
Name
ID
Ydjc
YdjC homolog (bacterial)
MGI:1916351
Synonyms 1810015A11Rik, 4930521M19Rik
Feature Type protein coding gene
Genetic Map
Chromosome 16
10.63 cM, cytoband B1
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr16:17144621-17160701 bp, + strand
From VEGA annotation of GRCm38

  16081 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:19062  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Ydjc

Human
homologs
Human Homolog YDJC, YdjC homolog (bacterial)
NCBI Gene ID 150223
neXtProt AC  NX_A8MPS7
Human Chr (Location)  22q11.21; chr22:21628089-21644728 (-)  GRCh38
Alleles
and
phenotypes
All alleles(5) : Targeted(3) Gene trapped(2)
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process carbohydrate metabolic process
Component cellular_component
Function catalytic activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
External Resources: FuncBase
Expression
cDNA source data(28)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(29) Genomic(1) cDNA(28)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000024793 (Evidence)
Ensembl Gene ModelENSMUSG00000041774 (Evidence)
Entrez Gene69101 (Evidence)
UniGene101656
DFCITC1582144, TC1592611, TC1615845, TC1620687
NIA Mouse Gene IndexU016863
Consensus CDS ProjectCCDS27996.1
International Mouse Knockout Project StatusYdjc
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000024793 VEGA Gene Model | MGI Sequence Detail 16081 C57BL/6J ±  kb
transcript OTTMUST00000061063 VEGA | MGI Sequence Detail 1297 Not Applicable 
polypeptide OTTMUSP00000029880 VEGA | MGI Sequence Detail 310 Not Applicable 

For the selected sequences
All sequences(44) RefSeq(4) UniProt(2)
Polymorphisms SNPs within 2kb(25 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel
InterPro IPR002509 Polysaccharide deacetylase
InterPro IPR006879 Uncharacterised protein family UPF0249/HpnK
Protein Ontology PR:000032523 UPF0249 protein ydjC homolog
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(34)
Other
accession IDs
MGI:1918909

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory