About   Help   FAQ
Ydjc
Gene Detail
Symbol

Name
ID
Ydjc
YdjC homolog (bacterial)
MGI:1916351
Synonyms
1810015A11Rik, 4930521M19Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 16
10.63 cM, cytoband B1
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr16:17144621-17160701 bp, + strand
From VEGA annotation of GRCm38

  16081 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:19062  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: YDJC
Gene Tree: Ydjc

Human
homologs
YDJC, YdjC homolog (bacterial)
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 150223
neXtProt AC: NX_A8MPS7

Human Chr (Location): 22q11.21; chr22:21628089-21630325 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Gene trapped(2) Targeted(3)
Interactions
Ydjc interacts with 246 markers (Mir7-1, Mir15a, Mir15b, ...)
Gene Ontology
(GO)
classifications
Expression
cDNA source data(28)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase ydjc ; ZFIN ydjc    NEW 
Molecular
reagents
All nucleic(29) Genomic(1) cDNA(28)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000024793 (Evidence)
Ensembl Gene Model ENSMUSG00000041774 (Evidence)
Entrez Gene 69101 (Evidence)
UniGene 101656
DFCI TC1582144, TC1592611, TC1615845, TC1620687
NIA Mouse Gene Index U016863
EC 3.5.1.-
Consensus CDS Project CCDS27996.1
International Mouse Phenotyping Consortium Status Ydjc
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000024793 VEGA Gene Model | MGI Sequence Detail 16081 C57BL/6J ±  kb
transcript OTTMUST00000061063 VEGA | MGI Sequence Detail 1297 Not Applicable 
polypeptide OTTMUSP00000029880 VEGA | MGI Sequence Detail 310 Not Applicable 

For the selected sequences
All sequences(44) RefSeq(4) UniProt(2)
Polymorphisms
SNPs within 2kb(25 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel
InterPro IPR002509 Polysaccharide deacetylase
InterPro IPR006879 Uncharacterised protein family UPF0249/HpnK
Protein Ontology PR:000032523 UPF0249 protein ydjC homolog
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(37)
Other
accession IDs
MGI:1918909

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
08/18/2015
MGI 6.0
The Jackson Laboratory