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Ydjc
Gene Detail
Symbol

Name
ID
Ydjc
YdjC homolog (bacterial)
MGI:1916351
Synonyms
1810015A11Rik, 4930521M19Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 16
10.63 cM, cytoband B1
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr16:17144621-17160701 bp, + strand
From VEGA annotation of GRCm38

  16081 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
Gene Tree: Ydjc
Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Gene trapped(2) Targeted(3)
Interactions
Ydjc interacts with 247 markers (Mir7-1, Mir15a, Mir15b, ...)
Gene Ontology
(GO)
classifications
Expression
cDNA source data(27)
External Resources: Allen Institute   Expression Atlas
Molecular
reagents
All nucleic(28) Genomic(1) cDNA(27)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000024793 (Evidence)
Ensembl Gene ModelENSMUSG00000041774 (Evidence)
Entrez Gene102637667, 69101
UniGene101656
DFCITC1592611, TC1582144
NIA Mouse Gene IndexU016863
Consensus CDS ProjectCCDS27996.1
International Mouse Knockout Project StatusYdjc
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000024793 VEGA Gene Model | MGI Sequence Detail 16081 C57BL/6J ±  kb
transcript OTTMUST00000061063 VEGA | MGI Sequence Detail 1297 Not Applicable 
polypeptide OTTMUSP00000029880 VEGA | MGI Sequence Detail 310 Not Applicable 

For the selected sequences
All sequences(35) RefSeq(1) UniProt(3)
Polymorphisms
SNPs within 2kb(25 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel
InterPro IPR002509 Polysaccharide deacetylase
InterPro IPR006879 Uncharacterised protein family UPF0249/HpnK
Protein Ontology PR:000032523 UPF0249 protein ydjC homolog
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(35)
Other
accession IDs
MGI:1918909

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory