About   Help   FAQ
1110065P20Rik
Gene Detail
Symbol

Name
ID
1110065P20Rik
RIKEN cDNA 1110065P20 gene
MGI:1916170
Synonyms
C530005M16Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 4
57.92 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr4:124849080-124851196 bp, - strand
From VEGA annotation of GRCm38

  2117 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HCOP human homology predictions: C1orf122
Gene Tree: 1110065P20Rik
Human
homologs
C1orf122, chromosome 1 open reading frame 122
Orthology source: HGNC

IDs:
NCBI Gene ID: 127687
neXtProt AC: NX_Q6ZSJ8

Human Synonyms: ALAESM

Human Chr (Location): 1p34.3; chr1:37807801-37809454 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Genomic Mutations involving 1110065P20Rik (1)
Incidental mutations (data from CvDC )
Interactions
1110065P20Rik interacts with 34 markers (Mir18, Mir18b, Mir19b-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
Expression
Literature Summary: (1 records)
Data Summary: Results (10)    Tissues (5)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 10
cDNA source data(3)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(5) Genomic(1) cDNA(4)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000009174 (Evidence)
Ensembl Gene Model ENSMUSG00000078570 (Evidence)
Entrez Gene 68920 (Evidence)
NIA Mouse Gene Index U025507
Consensus CDS Project CCDS51298.1
International Mouse Phenotyping Consortium Status 1110065P20Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000009174 VEGA Gene Model | MGI Sequence Detail 2117 C57BL/6J ±  kb
transcript OTTMUST00000118131 VEGA | MGI Sequence Detail 1223 Not Applicable 
polypeptide OTTMUSP00000065966 VEGA | MGI Sequence Detail 158 Not Applicable 

For the selected sequences
All sequences(45) RefSeq(9) UniProt(4)
Polymorphisms
SNPs within 2kb(6 from dbSNP Build 137)
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(20)
Other
accession IDs
MGI:1924900

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
06/23/2015
MGI 5.22
The Jackson Laboratory