1190002N15Rik
Gene Detail

Symbol Name ID

1190002N15Rik RIKEN cDNA 1190002N15 gene MGI:1916111

Synonyms

GoPro49

Feature Type

protein coding gene

Genetic Map

Chromosome 9

49.03 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)

Sequence Map

Chr9:94517864-94538081 bp, - strand From NCBI annotation of GRCm38   20218 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:18315  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken

Gene Tree: 1190002N15Rik

Human homologs

Human Homolog		C3orf58, chromosome 3 open reading frame 58
NCBI Gene ID		205428
neXtProt AC		NX_Q8NDZ4
Human Synonyms		DIA1
Human Chr (Location)		3q24; chr3:143690640-143711210 (+)  GRCh37.p10

Alleles and phenotypes

All alleles(5) : Targeted(4) Gene trapped(1)

Gene Ontology (GO) classifications

All GO classifications: (6 annotations)

Process	vesicle targeting, to, from or within Golgi
Component	COPI-coated vesicle, COPI vesicle coat, ...
Function	molecular_function

External Resources: FuncBase

Expression

Literature Summary: (3 records)
Data Summary: Results (13)    Tissues (8)   
Theiler Stages: 21, 22, 24, 28

Assay Type	Results
RNA in situ	13

cDNA source data(58)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(58) cDNA(58)
Microarray probesets(6)

Other database links

Ensembl Gene Model	ENSMUSG00000045414 (Evidence)
Entrez Gene	68861 (Evidence)
UniGene	258746
DFCI	TC1583819, TC1601184, TC1622696, TC1623343, TC1718705
DoTS	DT.101157014, DT.91444541
NIA Mouse Gene Index	U031195
Consensus CDS Project	CCDS40725.1
International Mouse Knockout Project Status	1190002N15Rik

Sequences

Length	Strain/Species
genomic	68861	NCBI Gene Model | MGI Sequence Detail	20218	C57BL/6J
transcript	NM_001033145	RefSeq | MGI Sequence Detail	3950	Not Specified
polypeptide	Q3USZ8	UniProt | EBI | MGI Sequence Detail	444	Not Applicable

All sequences(28) RefSeq(2) UniProt(3)

Polymorphisms

SNPs(129 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR020519	Uncharacterised protein family UPF0672

Graphical View of Protein Domain Structure

References

(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:188355 Miyoshi G, et al., Dynamic FoxG1 expression coordinates the integration of multipolar pyramidal neuron precursors into the cortical plate. Neuron. 2012 Jun 21;74(6):1045-58
All references(28)