About   Help   FAQ
1190002N15Rik
Gene Detail
 Symbol
Name
ID
1190002N15Rik
RIKEN cDNA 1190002N15 gene
MGI:1916111
Synonyms GoPro49
Feature Type protein coding gene
Genetic Map
Chromosome 9
49.03 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr9:94517864-94538081 bp, - strand
From VEGA annotation of GRCm38

  20218 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:18315  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 2 zebrafish

Gene Tree: 1190002N15Rik

Human
homologs
Human Homolog C3orf58, chromosome 3 open reading frame 58
NCBI Gene ID 205428
neXtProt AC  NX_Q8NDZ4
Human Synonyms  DIA1, GoPro49, HASF
Human Chr (Location)  3q24; chr3:143971798-143992368 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Gene trapped(1) Targeted(4)
Incidental mutations (data from Mutagenetix , APF )
Interactions
1190002N15Rik interacts with 336 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (11 annotations)
Process cardiac muscle cell proliferation, regulation of phosphatidylinositol 3-kinase signaling, ...
Component COPI-coated vesicle, COPI vesicle coat, ...
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (4 records)
Data Summary: Results (93)    Tissues (62)    Images (33)
Theiler Stages: 10, 18, 19, 20, 21, 22, 23, 24, 25, 27, 28
Assay TypeResults
RNA in situ 83
RT-PCR 10
cDNA source data(59)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(61) cDNA(59) Primer pair(2)
Microarray probesets(6)
Other database
links
VEGA Gene ModelOTTMUSG00000046987 (Evidence)
Ensembl Gene ModelENSMUSG00000045414 (Evidence)
Entrez Gene68861 (Evidence)
UniGene258746
DFCITC1583819, TC1601184, TC1622696, TC1623343, TC1718705
DoTSDT.101157014, DT.91444541
NIA Mouse Gene IndexU031195
Consensus CDS ProjectCCDS40725.1
International Mouse Knockout Project Status1190002N15Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000046987 VEGA Gene Model | MGI Sequence Detail 20218 C57BL/6J ±  kb
transcript OTTMUST00000121744 VEGA | MGI Sequence Detail 3950 Not Applicable 
polypeptide OTTMUSP00000066992 VEGA | MGI Sequence Detail 430 Not Applicable 

For the selected sequences
All sequences(30) RefSeq(2) UniProt(2)
Polymorphisms SNPs within 2kb(231 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR022049 Uncharacterised protein family FAM69
InterPro IPR020519 Uncharacterised protein family UPF0672
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:196080 Elsen GE, et al., The protomap is propagated to cortical plate neurons through an Eomes-dependent intermediate map. Proc Natl Acad Sci U S A. 2013 Mar 5;110(10):4081-6
All references(31)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
09/09/2014
MGI 5.19
The Jackson Laboratory