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Lce1e Gene Detail
Summary
  • Symbol
    Lce1e
  • Name
    late cornified envelope 1E
  • Synonyms
    1110031B11Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915944
    NCBI Gene: 68694
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:92614708-92616381 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 40.14 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    9 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915944
protein coding gene Chr3:92614707-92616381 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027511
protein coding gene Chr3:93161788-93163461 (-)
A/J MGP_AJ_G0027478
protein coding gene Chr3:90230877-90232668 (-)
AKR/J MGP_AKRJ_G0027443
protein coding gene Chr3:92341525-92343198 (-)
BALB/cJ MGP_BALBcJ_G0027486
protein coding gene Chr3:90038498-90040606 (-)
C3H/HeJ MGP_C3HHeJ_G0027226
protein coding gene Chr3:92564186-92565859 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027930
protein coding gene Chr3:96703923-96705596 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0027200
protein coding gene Chr3:100032217-100034350 (-)
DBA/2J MGP_DBA2J_G0027338
protein coding gene Chr3:89558741-89560414 (-)
FVB/NJ MGP_FVBNJ_G0027306
protein coding gene Chr3:87722275-87723918 (-)
LP/J MGP_LPJ_G0027446
protein coding gene Chr3:94377302-94378945 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027331
protein coding gene Chr3:106311608-106313735 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027989
protein coding gene Chr3:92075450-92077123 (-)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0026225
protein coding gene Chr3:90424756-90425343 (-)
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    LCE2A, late cornified envelope 2A
  • Vertebrate Orthologs
    5
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    LCE2A, late cornified envelope 2A
  • Synonyms
    LEP9
  • Links
    NCBI Gene ID: 353139
    neXtProt AC: NX_Q5TA79
    UniProt: Q5TA79

  • Chr Location
    1q21.3; chr1:152698364-152699442 (+)  GRCh38.p7

  • Human Ortholog
    LCE2B, late cornified envelope 2B
  • Synonyms
    LEP10, SPRL1B, XP5
  • Links
    NCBI Gene ID: 26239
    neXtProt AC: NX_O14633
    UniProt: O14633

  • Chr Location
    1q21.3; chr1:152686123-152687401 (+)  GRCh38.p7

  • Human Ortholog
    LCE2C, late cornified envelope 2C
  • Synonyms
    LEP11
  • Links
    NCBI Gene ID: 353140
    neXtProt AC: NX_Q5TA81
    UniProt: Q5TA81

  • Chr Location
    1q21.3; chr1:152675315-152676574 (+)  GRCh38.p7

  • Human Ortholog
    LCE2D, late cornified envelope 2D
  • Synonyms
    LEP12, SPRL1A
  • Links
    NCBI Gene ID: 353141
    neXtProt AC: NX_Q5TA82
    UniProt: Q5TA82

  • Chr Location
    1q21.3; chr1:152663411-152664659 (+)  GRCh38.p7

  • Human Ortholog
    LCE5A, late cornified envelope 5A
  • Synonyms
    LEP18, SPRL5A
  • Links
    NCBI Gene ID: 254910
    neXtProt AC: NX_Q5TCM9
    UniProt: Q5TCM9

  • Chr Location
    1q21.3; chr1:152510844-152512177 (+)  GRCh38.p7

Human Diseases
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  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000068889 Ensembl Gene Model | MGI Sequence Detail 1674 C57BL/6J ±  kb
transcript ENSMUST00000090867 Ensembl | MGI Sequence Detail 711 Not Applicable  
polypeptide ENSMUSP00000088380 Ensembl | MGI Sequence Detail 143 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR028205 Late cornified envelope protein
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 2
Other
Accession IDs
less
MGI:2139748
References
more
  • Summaries
    All 19
    Diseases 1
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
01/18/2022
MGI 6.17
The Jackson Laboratory