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1110012L19Rik
Gene Detail
 Symbol
Name
ID
1110012L19Rik
RIKEN cDNA 1110012L19 gene
MGI:1915868
Feature Type protein coding gene
Genetic Map
Chromosome X
36.02 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
ChrX:70385877-70389417 bp, + strand
From VEGA annotation of GRCm38

  3541 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:12274  Vertebrate Homology Class
2 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: 1110012L19Rik

Human
homologs
Human Homolog CXorf40A, chromosome X open reading frame 40A
NCBI Gene ID 91966
neXtProt AC  NX_Q8TE69
Human Synonyms  CXorf40, EOLA1
Human Chr (Location)  Xq28; chrX:149540793-149550541 (+)  GRCh38
Human Homolog CXorf40B, chromosome X open reading frame 40B
NCBI Gene ID 541578
neXtProt AC  NX_Q96DE9
Human Chr (Location)  Xq28; chrX:149929527-149938850 (-)  GRCh38
Interactions
1110012L19Rik interacts with 66 markers (Mir18b, Mir19a, Mir19b-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (37)    Tissues (6)    Images (20)
Theiler Stages: 23
Assay TypeResults
RNA in situ 37
cDNA source data(40)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(40) cDNA(40)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000017762 (Evidence)
Ensembl Gene ModelENSMUSG00000045237 (Evidence)
Entrez Gene68618 (Evidence)
UniGene293255
DFCITC1578950
DoTSDT.492661
NIA Mouse Gene IndexU032134
Consensus CDS ProjectCCDS30174.1
International Mouse Knockout Project Status1110012L19Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000017762 VEGA Gene Model | MGI Sequence Detail 3541 C57BL/6J ±  kb
transcript OTTMUST00000043017 VEGA | MGI Sequence Detail 1094 Not Applicable 
polypeptide OTTMUSP00000019339 VEGA | MGI Sequence Detail 157 Not Applicable 

For the selected sequences
All sequences(18) RefSeq(2) UniProt(2)
Polymorphisms SNPs within 2kb(51 from dbSNP Build 137)    SNPs within 2kb including multiple locations(61)
Protein-related
information
ResourceIDDescription
InterPro IPR007374 ASCH domain
InterPro IPR015947 PUA-like domain
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(21)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory