1110012L19Rik
Gene Detail

Symbol Name ID

1110012L19Rik RIKEN cDNA 1110012L19 gene MGI:1915868

Feature Type

protein coding gene

Genetic Map

Chromosome X

36.02 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)

Sequence Map

ChrX:70385877-70389417 bp, + strand From VEGA annotation of GRCm38   3541 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:12274  Vertebrate Homology Class
2 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 2 dog; 1 chicken; 1 zebrafish

Gene Tree: 1110012L19Rik

Human homologs

Human Homolog		CXorf40A, chromosome X open reading frame 40A
NCBI Gene ID		91966
neXtProt AC		NX_Q8TE69
Human Synonyms		CXorf40, EOLA1
Human Chr (Location)		Xq28; chrX:148622519-148632086 (+)  GRCh37.p10
Human Homolog		CXorf40B, chromosome X open reading frame 40B
NCBI Gene ID		541578
neXtProt AC		NX_Q96DE9
Human Chr (Location)		Xq28; chrX:149100415-149106716 (-)  GRCh37.p10

Gene Ontology (GO) classifications

All GO classifications: (3 annotations)

Process	biological_process
Component	cellular_component
Function	molecular_function

External Resources: FuncBase

Expression

Literature Summary: (1 records)
Data Summary: Results (37)    Tissues (6)    Images (20)
Theiler Stages: 23

Assay Type	Results
RNA in situ	37

cDNA source data(40)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(40) cDNA(40)
Microarray probesets(3)

Other database links

VEGA Gene Model	OTTMUSG00000017762 (Evidence)
Ensembl Gene Model	ENSMUSG00000045237 (Evidence)
Entrez Gene	68618 (Evidence)
UniGene	293255
DFCI	TC1578950
DoTS	DT.492661
NIA Mouse Gene Index	U032134
Consensus CDS Project	CCDS30174.1
International Mouse Knockout Project Status	1110012L19Rik

Sequences

Length	Strain/Species
genomic	OTTMUSG00000017762	VEGA Gene Model | MGI Sequence Detail	3541	C57BL/6J
transcript	OTTMUST00000043017	VEGA | MGI Sequence Detail	1094	Not Applicable
polypeptide	OTTMUSP00000019339	VEGA | MGI Sequence Detail	157	Not Applicable

All sequences(18) RefSeq(2) UniProt(2)

Polymorphisms

SNPs(42 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR007374	ASCH domain
InterPro	IPR015947	PUA-like domain

References

(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(21)