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1110008E08Rik
Gene Detail
Symbol

Name
ID
1110008E08Rik
RIKEN cDNA 1110008E08 gene
MGI:1915750
Feature Type
lincRNA gene
Genetic Map
Chromosome 16
51.71 cM, cytoband C3.3
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr16:90554164-90554886 bp, + strand
From VEGA annotation of GRCm38

  723 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
Gene Tree: 1110008E08Rik
Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Targeted(5)
Genomic Mutations involving 1110008E08Rik (5)
Incidental mutations (data from APF )
Interactions
1110008E08Rik interacts with 59 markers (Mir24-1, Mir24-2, Mir27a, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(1)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(1) cDNA(1)
Microarray probesets(2)
Other database
links
VEGA Gene Model OTTMUSG00000044895 (Evidence)
Ensembl Gene Model ENSMUSG00000046119 (Evidence)
Entrez Gene 68500 (Evidence)
UniGene 484045
DFCI TC1596041
DoTS DT.91302053
NIA Mouse Gene Index U017356
International Mouse Phenotyping Consortium Status 1110008E08Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000044895 VEGA Gene Model | MGI Sequence Detail 723 C57BL/6J ±  kb
transcript AK003565 GenBank | EMBL | DDBJ | MGI Sequence Detail 721 C57BL/6J 
polypeptide Q9D1H3 UniProt | EBI | MGI Sequence Detail 107 Not Applicable 

For the selected sequences
All sequences(11) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(54 from dbSNP Build 137)
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
All references(15)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory