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0610011F06Rik
Gene Detail
Symbol

Name
ID
0610011F06Rik
RIKEN cDNA 0610011F06 gene
MGI:1915597
Feature Type
protein coding gene
Genetic Map
Chromosome 17
12.97 cM, cytoband B1
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr17:25875464-25886007 bp, + strand
From VEGA annotation of GRCm38

  10544 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:16917  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 western clawed frog; 1 zebrafish

Gene Tree: 0610011F06Rik

Human
homologs
Human Homolog C16orf13, chromosome 16 open reading frame 13
NCBI Gene ID 84326
neXtProt AC  NX_Q96S19
Human Chr (Location)  16p13.3; chr16:634427-636366 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Radiation induced(2) Targeted(1)
Genomic Mutations involving 0610011F06Rik (2)
Incidental mutations (data from APF )
Interactions
0610011F06Rik interacts with 69 markers (Mir17, Mir20b, Mir23a, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (2)    Tissues (2)    Images (2)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 2
cDNA source data(59)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(59) cDNA(59)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000035873 (Evidence)
Ensembl Gene ModelENSMUSG00000025731 (Evidence)
Entrez Gene68347 (Evidence)
UniGene35098
DFCITC1579028, TC1629736, TC1715630, TC1645657
DoTSDT.55100763, DT.94258537, DT.91340658, DT.94258535
NIA Mouse Gene IndexU017694
Consensus CDS ProjectCCDS28536.1
International Mouse Knockout Project Status0610011F06Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000035873 VEGA Gene Model | MGI Sequence Detail 10544 C57BL/6J ±  kb
transcript OTTMUST00000091995 VEGA | MGI Sequence Detail 817 Not Applicable 
polypeptide OTTMUSP00000050748 VEGA | MGI Sequence Detail 204 Not Applicable 

For the selected sequences
All sequences(50) RefSeq(2) UniProt(9)
Polymorphisms
SNPs within 2kb(27 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR010342 Protein of unknown function DUF938
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(25)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/11/2014
MGI 5.20
The Jackson Laboratory