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Tecr
Gene Detail
 Symbol
Name
ID
Tecr
trans-2,3-enoyl-CoA reductase
MGI:1915408
Synonyms 2410016D23Rik, A230102P12Rik, D17Ertd178e, Gpsn2, SC2
Feature Type protein coding gene
Genetic Map
Chromosome 8
40.22 cM, cytoband C3
Detailed Genetic Map ± 1 cM


Mapping data(4)
Sequence Map
Chr8:83571700-83594491 bp, - strand
From Ensembl annotation of GRCm38

  22792 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:36231  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Protein SuperFamily: synaptic glycoprotein SC2
Gene Tree: Tecr

Human
homologs
Human Homolog TECR, trans-2,3-enoyl-CoA reductase
NCBI Gene ID 9524
neXtProt AC  NX_Q9NZ01
Human Synonyms  GPSN2, MRT14, SC2, TER
Human Chr (Location)  19p13.12; chr19:14529548-14565980 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human TECR
Mutations,
alleles, and
phenotypes
All mutations/alleles(29) : Gene trapped(26) Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Tecr interacts with 15 markers (Mir34b, Mir93, Mir143, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (15 annotations)
Process fatty acid elongation, lipid metabolic process, ...
Component cytoplasm, endoplasmic reticulum, ...
Function oxidoreductase activity, oxidoreductase activity, acting on the CH-CH group of donors
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (197)    Tissues (113)    Images (41)
Theiler Stages: 19, 22, 23
Assay TypeResults
RNA in situ 195
RT-PCR 2
cDNA source data(285)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(288) cDNA(286) Primer pair(2)
Microarray probesets(3)
Other database
links
Ensembl Gene ModelENSMUSG00000031708 (Evidence)
Entrez Gene106529 (Evidence)
UniGene352239
DFCITC1573396, TC1579318, TC1595988
DoTSDT.101145159, DT.101369146, DT.101369450, DT.110858638, DT.110858751, DT.110858846, DT.97367062, DT.99868602, DT.99868612, DT.99872769
NIA Mouse Gene IndexU030016, U085458, U355557
EC1.3.1.93
Consensus CDS ProjectCCDS40403.1, CCDS52609.1
International Mouse Knockout Project StatusTecr
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000031708 Ensembl Gene Model | MGI Sequence Detail 22792 C57BL/6J ±  kb
transcript ENSMUST00000163837 Ensembl | MGI Sequence Detail 1272 Not Applicable 
polypeptide ENSMUSP00000128329 Ensembl | MGI Sequence Detail 362 Not Applicable 

For the selected sequences
All sequences(56) RefSeq(10) UniProt(6)
Polymorphisms SNPs within 2kb(329 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001104 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal
Protein Ontology PR:000008207 very-long-chain enoyl-CoA reductase
References (Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(44)
Other
accession IDs
MGI:1098578, MGI:1916958, MGI:2146802

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory