Tecr
Gene Detail

Symbol Name ID

Tecr trans-2,3-enoyl-CoA reductase MGI:1915408

Synonyms

2410016D23Rik, A230102P12Rik, D17Ertd178e, Gpsn2, SC2

Feature Type

protein coding gene

Genetic Map

Chromosome 8

40.22 cM, cytoband C3
Detailed Genetic Map ± 1 cM


Mapping data(4)

Sequence Map

Chr8:83571700-83594491 bp, - strand From Ensembl annotation of GRCm38   22792 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:36231  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Protein SuperFamily: synaptic glycoprotein SC2
Gene Tree: Tecr

Human homologs

Human Homolog		TECR, trans-2,3-enoyl-CoA reductase
NCBI Gene ID		9524
neXtProt AC		NX_Q9NZ01
Human Synonyms		GPSN2, MRT14, SC2, TER
Human Chr (Location)		19p13.12; chr19:14640379-14676792 (+)  GRCh37.p10
Disease Associations		(1) Diseases Associated with Human TECR

Alleles and phenotypes

All alleles(27) : Targeted(1) Gene trapped(26)

Gene Ontology (GO) classifications

All GO classifications: (14 annotations)

Process	fatty acid elongation, lipid metabolic process, ...
Component	cytoplasm, endoplasmic reticulum, ...
Function	oxidoreductase activity, oxidoreductase activity, acting on the CH-CH group of donors

External Resources: FuncBase

Expression

Literature Summary: (3 records)
Data Summary: Results (197)    Tissues (113)    Images (41)
Theiler Stages: 19, 22, 23

Assay Type	Results
RNA in situ	195
RT-PCR	2

cDNA source data(285)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(288) cDNA(286) Primer pair(2)
Microarray probesets(3)

Other database links

Ensembl Gene Model	ENSMUSG00000031708 (Evidence)
Entrez Gene	106529 (Evidence)
UniGene	352239
DFCI	TC1573396, TC1579318, TC1595988
DoTS	DT.101145159, DT.101369146, DT.101369450, DT.110858638, DT.110858751, DT.110858846, DT.97367062, DT.99868602, DT.99868612, DT.99872769
NIA Mouse Gene Index	U030016, U085458, U355557
EC	1.3.1.93
Consensus CDS Project	CCDS40403.1, CCDS52609.1
International Mouse Knockout Project Status	Tecr

Sequences

Length	Strain/Species
genomic	ENSMUSG00000031708	Ensembl Gene Model | MGI Sequence Detail	22792	C57BL/6J
transcript	ENSMUST00000163837	Ensembl | MGI Sequence Detail	1272	Not Applicable
polypeptide	ENSMUSP00000128329	Ensembl | MGI Sequence Detail	362	Not Applicable

All sequences(50) RefSeq(4) UniProt(6)

Polymorphisms

SNPs(134 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR001104	3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal
Protein Ontology	PR:000008207	synaptic glycoprotein SC2

References

(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(43)

Other accession IDs

MGI:1098578, MGI:1916958, MGI:2146802