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Tecr
Gene Detail
Symbol

Name
ID
Tecr
trans-2,3-enoyl-CoA reductase
MGI:1915408
Synonyms
2410016D23Rik, A230102P12Rik, D17Ertd178e, Gpsn2, SC2
Feature Type
protein coding gene
Genetic Map
Chromosome 8
40.22 cM, cytoband C3
Detailed Genetic Map ± 1 cM


Mapping data(4)
Sequence Map
Chr8:83571700-83594491 bp, - strand
From Ensembl annotation of GRCm38

  22792 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:36231  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: TECR
Protein SuperFamily: synaptic glycoprotein SC2
Gene Tree: Tecr

Human
homologs
TECR, trans-2,3-enoyl-CoA reductase
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 9524
neXtProt AC: NX_Q9NZ01

Human Synonyms: GPSN2, MRT14, SC2, TER

Human Chr (Location): 19p13.12; chr19:14527768-14565980 (+)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human TECR

Mutations,
alleles, and
phenotypes
All mutations/alleles(27) : Gene trapped(24) Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Tecr interacts with 15 markers (Mir34b, Mir93, Mir143, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (3 records)
Data Summary: Results (197)    Tissues (113)    Images (41)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 195
RT-PCR 2
cDNA source data(285)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase tecr ; ZFIN tecrb    NEW 
Molecular
reagents
All nucleic(288) cDNA(286) Primer pair(2)
Microarray probesets(3)
Other database
links
Ensembl Gene Model ENSMUSG00000031708 (Evidence)
Entrez Gene 106529 (Evidence)
UniGene 352239
DFCI TC1573396, TC1579318, TC1595988
DoTS DT.101145159, DT.101369146, DT.101369450, DT.110858638, DT.110858751, DT.110858846, DT.97367062, DT.99868602, DT.99868612, DT.99872769
NIA Mouse Gene Index U030016, U085458, U355557
EC 1.3.1.93
Consensus CDS Project CCDS40403.1, CCDS52609.1
International Mouse Phenotyping Consortium Status Tecr
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000031708 Ensembl Gene Model | MGI Sequence Detail 22792 C57BL/6J ±  kb
transcript ENSMUST00000163837 Ensembl | MGI Sequence Detail 1272 Not Applicable 
polypeptide ENSMUSP00000128329 Ensembl | MGI Sequence Detail 362 Not Applicable 

For the selected sequences
All sequences(52) RefSeq(4) UniProt(6)
Polymorphisms
SNPs within 2kb(329 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001104 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal
InterPro IPR029071 Ubiquitin-related domain
Protein Ontology PR:000008207 very-long-chain enoyl-CoA reductase
References
(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(42)
Other
accession IDs
MGI:1098578, MGI:1916958, MGI:2146802

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/25/2015
MGI 6.0
The Jackson Laboratory