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1110058L19Rik
Gene Detail
Symbol

Name
ID
1110058L19Rik
RIKEN cDNA 1110058L19 gene
MGI:1915252
Synonyms
1700001E18Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 1
9.86 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr1:23995939-24005656 bp, - strand
From VEGA annotation of GRCm38

  9718 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:32661  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: 1110058L19Rik

Human
homologs
Human Homolog C6orf57, chromosome 6 open reading frame 57
NCBI Gene ID 135154
neXtProt AC  NX_Q5VUM1
Human Chr (Location)  6q13; chr6:70566922-70588903 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Gene trapped(1) Targeted(1)
Interactions
1110058L19Rik interacts with 43 markers (Mir9-1, Mir9-2, Mir9-3, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process innate immune response
Component extracellular region, mitochondrion
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(43)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(44) cDNA(44)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000022115 (Evidence)
Ensembl Gene ModelENSMUSG00000026154 (Evidence)
Entrez Gene68002 (Evidence)
UniGene250424
DFCITC1580469
DoTSDT.493017
NIA Mouse Gene IndexU021178
Consensus CDS ProjectCCDS14852.1
International Mouse Knockout Project Status1110058L19Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000022115 VEGA Gene Model | MGI Sequence Detail 9718 C57BL/6J ±  kb
transcript OTTMUST00000052493 VEGA | MGI Sequence Detail 683 Not Applicable 
polypeptide OTTMUSP00000024899 VEGA | MGI Sequence Detail 104 Not Applicable 

For the selected sequences
All sequences(22) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(155 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR012875 Protein of unknown function DUF1674
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:155125 Yang IV, et al., Identification of novel genes that mediate innate immunity using inbred mice. Genetics. 2009 Dec;183(4):1535-44
All references(27)
Other
accession IDs
MGI:1922711, MGI:2138344

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/11/2014
MGI 5.20
The Jackson Laboratory