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Sdhaf4
Gene Detail
Symbol

Name
ID
Sdhaf4
succinate dehydrogenase complex assembly factor 4
MGI:1915252
Synonyms
1110058L19Rik, 1700001E18Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 1
9.86 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr1:23995939-24005656 bp, - strand
From VEGA annotation of GRCm38

  9718 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:32661  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: SDHAF4
Gene Tree: Sdhaf4

Human
homologs
SDHAF4, succinate dehydrogenase complex assembly factor 4
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 135154
neXtProt AC: NX_Q5VUM1

Human Synonyms: C6orf57, Sdh8

Human Chr (Location): 6q13; chr6:70566922-70588903 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Gene trapped(1) Targeted(1)
Interactions
Sdhaf4 interacts with 43 markers (Mir9-1, Mir9-2, Mir9-3, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process innate immune response
Component mitochondrion
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(43)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(44) cDNA(44)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000022115 (Evidence)
Ensembl Gene Model ENSMUSG00000026154 (Evidence)
Entrez Gene 68002 (Evidence)
UniGene 250424
DFCI TC1580469
DoTS DT.493017
NIA Mouse Gene Index U021178
Consensus CDS Project CCDS14852.1
International Mouse Phenotyping Consortium Status Sdhaf4
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000022115 VEGA Gene Model | MGI Sequence Detail 9718 C57BL/6J ±  kb
transcript OTTMUST00000052493 VEGA | MGI Sequence Detail 683 Not Applicable 
polypeptide OTTMUSP00000024899 VEGA | MGI Sequence Detail 104 Not Applicable 

For the selected sequences
All sequences(22) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(155 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR012875 Protein of unknown function DUF1674
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:155125 Yang IV, et al., Identification of novel genes that mediate innate immunity using inbred mice. Genetics. 2009 Dec;183(4):1535-44
All references(26)
Other
accession IDs
MGI:1922711, MGI:2138344

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory