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1110008F13Rik
Gene Detail
Symbol

Name
ID
1110008F13Rik
RIKEN cDNA 1110008F13 gene
MGI:1914638
Feature Type
protein coding gene
Genetic Map
Chromosome 2
77.89 cM, cytoband H2
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr2:156863128-156873563 bp, + strand
From VEGA annotation of GRCm38

  10436 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:10315  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: 1110008F13Rik

Human
homologs
Human Homolog C20orf24, chromosome 20 open reading frame 24
NCBI Gene ID 55969
neXtProt AC  NX_Q9BUV8
Human Synonyms  RIP5
Human Chr (Location)  20q11.23; chr20:36605734-36612557 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(14) : Gene trapped(12) Targeted(2)
Interactions
1110008F13Rik interacts with 56 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component mitochondrion
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (38)    Tissues (7)    Images (19)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 38
cDNA source data(7)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(7) cDNA(7)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000016066 (Evidence)
Ensembl Gene ModelENSMUSG00000027637 (Evidence)
Entrez Gene67388 (Evidence)
Consensus CDS ProjectCCDS16970.1
International Mouse Knockout Project Status1110008F13Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000016066 VEGA Gene Model | MGI Sequence Detail 10436 C57BL/6J ±  kb
transcript OTTMUST00000038362 VEGA | MGI Sequence Detail 1045 Not Applicable 
polypeptide OTTMUSP00000017191 VEGA | MGI Sequence Detail 129 Not Applicable 

For the selected sequences
All sequences(30) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(119 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR010742 Rab5-interacting
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(26)
Other
accession IDs
MGI:2138894

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory