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2310039H08Rik
Gene Detail
Symbol

Name
ID
2310039H08Rik
RIKEN cDNA 2310039H08 gene
MGI:1914351
Feature Type
protein coding gene
Genetic Map
Chromosome 17
22.90 cM, cytoband C
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr17:46772635-46773407 bp, + strand
From NCBI annotation of GRCm38

  773 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:87029  Vertebrate Homology Class
1 mouse; 1 rat

HCOP human homology predictions: C6orf226
Gene Tree: 2310039H08Rik

Human
homologs
C6orf226, chromosome 6 open reading frame 226
Orthology source: HGNC

IDs:
NCBI Gene ID: 441150
neXtProt AC: NX_Q5I0X4

Human Chr (Location): 6p21.1; chr6:42890265-42890816 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(1) : Targeted(1)
Interactions
2310039H08Rik interacts with 21 markers (Mir96, Mir135b, Mir139, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(33)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(33) cDNA(33)
Microarray probesets(3)
Other database
links
Ensembl Gene Model ENSMUSG00000062619 (Evidence)
Entrez Gene 67101 (Evidence)
UniGene 358702
DFCI TC1580445
DoTS DT.491386
NIA Mouse Gene Index U018049
Consensus CDS Project CCDS28841.1
International Mouse Phenotyping Consortium Status 2310039H08Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 67101 NCBI Gene Model | MGI Sequence Detail 773 C57BL/6J ±  kb
transcript NM_025966 RefSeq | MGI Sequence Detail 801 C57BL/6 
polypeptide Q9D727 UniProt | EBI | MGI Sequence Detail 114 Not Applicable 

For the selected sequences
All sequences(17) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(31 from dbSNP Build 137)
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
All references(20)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/25/2015
MGI 6.0
The Jackson Laboratory