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1700019D03Rik
Gene Detail
 Symbol
Name
ID
1700019D03Rik
RIKEN cDNA 1700019D03 gene
MGI:1914330
Synonyms 2410136C24Rik, MGC:58779
Feature Type protein coding gene
Genetic Map
Chromosome 1
26.99 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr1:52922324-52963260 bp, - strand
From VEGA annotation of GRCm38

  40937 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:49994  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

Gene Tree: 1700019D03Rik

Human
homologs
Human Homolog C2orf88, chromosome 2 open reading frame 88
NCBI Gene ID 84281
neXtProt AC  NX_Q9BSF0
Human Synonyms  smAKAP
Human Chr (Location)  2q32.2; chr2:189879627-190203484 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(105) : Gene trapped(102) Targeted(3)
Incidental mutations (data from APF )
Interactions
1700019D03Rik interacts with 305 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process biological_process
Component membrane, plasma membrane
Function protein kinase A regulatory subunit binding
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (27)    Tissues (27)    Images (2)
Theiler Stages: 23, 27
Assay TypeResults
RNA in situ 27
cDNA source data(32)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(33) cDNA(33)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000021472 (Evidence)
Ensembl Gene ModelENSMUSG00000043629 (Evidence)
Entrez Gene67080 (Evidence)
UniGene236287
DFCITC1583752, TC1589924, TC1611480
Consensus CDS ProjectCCDS14949.1
International Mouse Knockout Project Status1700019D03Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000021472 VEGA Gene Model | MGI Sequence Detail 40937 C57BL/6J ±  kb
transcript OTTMUST00000050905 VEGA | MGI Sequence Detail 3565 Not Applicable 
polypeptide OTTMUSP00000023873 VEGA | MGI Sequence Detail 106 Not Applicable 

For the selected sequences
All sequences(40) RefSeq(12) UniProt(1)
Polymorphisms SNPs within 2kb(188 from dbSNP Build 137)
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:190524 Shalom-Barak T, et al., Placental PPARgamma regulates spatiotemporally diverse genes and a unique metabolic network. Dev Biol. 2012 Dec 1;372(1):143-55
All references(36)
Other
accession IDs
MGI:1915212, MGI:2138094

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/23/2014
MGI 5.19
The Jackson Laboratory