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Pxdc1
Gene Detail
 Symbol
Name
ID
Pxdc1
PX domain containing 1
MGI:1914145
Synonyms 1300014I06Rik
Feature Type protein coding gene
Genetic Map
Chromosome 13
14.16 cM, cytoband A4
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr13:34627840-34652681 bp, - strand
From VEGA annotation of GRCm38

  24842 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:12051  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Pxdc1

Human
homologs
Human Homolog PXDC1, PX domain containing 1
NCBI Gene ID 221749
neXtProt AC  NX_Q5TGL8
Human Synonyms  C6orf145
Human Chr (Location)  6p25.2; chr6:3722602-3752012 (-)  GRCh38
Alleles
and
phenotypes
All alleles(3) : Targeted(3)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function phosphatidylinositol binding
External Resources: FuncBase
Expression
cDNA source data(39)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(39) cDNA(39)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000027717 (Evidence)
Ensembl Gene ModelENSMUSG00000021411 (Evidence)
Entrez Gene66895 (Evidence)
UniGene28943
DFCITC1581947, TC1592468
DoTSDT.101364291, DT.530384
NIA Mouse Gene IndexU034680
Consensus CDS ProjectCCDS36632.1
International Mouse Knockout Project StatusPxdc1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000027717 VEGA Gene Model | MGI Sequence Detail 24842 C57BL/6J ±  kb
transcript OTTMUST00000068592 VEGA | MGI Sequence Detail 1863 Not Applicable 
polypeptide OTTMUSP00000034715 VEGA | MGI Sequence Detail 231 Not Applicable 

For the selected sequences
All sequences(40) RefSeq(5) UniProt(3)
Polymorphisms SNPs within 2kb(300 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001683 Phox homologous domain
Protein Ontology PR:000030765 PX domain-containing protein 1
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(28)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory