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Cdip1
Gene Detail
 Symbol
Name
ID
Cdip1
cell death inducing Trp53 target 1
MGI:1913876
Synonyms 2700048O17Rik, 5730403B10Rik, CDIP
Feature Type protein coding gene
Genetic Map
Chromosome 16
2.47 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr16:4750348-4790292 bp, - strand
From VEGA annotation of GRCm38

  39945 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:40879  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Cdip1

Human
homologs
Human Homolog CDIP1, cell death-inducing p53 target 1
NCBI Gene ID 29965
neXtProt AC  NX_Q9H305
Human Synonyms  C16orf5, CDIP, I1, LITAFL
Human Chr (Location)  16p13.3; chr16:4510675-4538815 (-)  GRCh38
Alleles
and
phenotypes
All alleles(16) : Gene trapped(14) Targeted(2)
Incidental mutations (data from APF )
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process apoptotic process, intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator, ...
Component nucleus
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (2)    Tissues (2)   
Theiler Stages: 15, 17
Assay TypeResults
RNA in situ 2
cDNA source data(14)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(16) cDNA(16)
Microarray probesets(7)
Other database
links
VEGA Gene ModelOTTMUSG00000026631 (Evidence)
Ensembl Gene ModelENSMUSG00000004071 (Evidence)
Entrez Gene66626 (Evidence)
DoTSDT.101245603, DT.101263743, DT.101301284, DT.495957, DT.55221335, DT.97377348, DT.99862085
Consensus CDS ProjectCCDS27925.1
International Mouse Knockout Project StatusCdip1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000026631 VEGA Gene Model | MGI Sequence Detail 39945 C57BL/6J ±  kb
transcript OTTMUST00000065933 VEGA | MGI Sequence Detail 3953 Not Applicable 
polypeptide OTTMUSP00000032930 VEGA | MGI Sequence Detail 208 Not Applicable 

For the selected sequences
All sequences(57) RefSeq(6) UniProt(2)
Polymorphisms SNPs within 2kb(127 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR006629 LPS-induced tumor necrosis factor alpha factor
References (Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:203766 Namba T, et al., CDIP1-BAP31 complex transduces apoptotic signals from endoplasmic reticulum to mitochondria under endoplasmic reticulum stress. Cell Rep. 2013 Oct 31;5(2):331-9
All references(33)
Other
accession IDs
MGI:1919832, MGI:2146549, MGI:2146673

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory