Cdip1
Gene Detail

Symbol Name ID

Cdip1 cell death inducing Trp53 target 1 MGI:1913876

Synonyms

2700048O17Rik, 5730403B10Rik, CDIP

Feature Type

protein coding gene

Genetic Map

Chromosome 16

2.47 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)

Sequence Map

Chr16:4750348-4790292 bp, - strand From VEGA annotation of GRCm38   39945 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:40879  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Cdip1

Human homologs

Human Homolog		CDIP1, cell death-inducing p53 target 1
NCBI Gene ID		29965
neXtProt AC		NX_Q9H305
Human Synonyms		C16orf5, CDIP, I1, LITAFL
Human Chr (Location)		16p13.3; chr16:4560676-4588816 (-)  GRCh37.p10

Alleles and phenotypes

All alleles(15) : Targeted(1) Gene trapped(14)

Gene Ontology (GO) classifications

All GO classifications: (7 annotations)

Process	apoptotic process, induction of apoptosis, ...
Component	nucleus

External Resources: FuncBase

Expression

Literature Summary: (1 records)
Data Summary: Results (2)    Tissues (2)   
Theiler Stages: 15, 17

Assay Type	Results
RNA in situ	2

cDNA source data(14)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(16) cDNA(16)
Microarray probesets(7)

Other database links

VEGA Gene Model	OTTMUSG00000026631 (Evidence)
Ensembl Gene Model	ENSMUSG00000004071 (Evidence)
Entrez Gene	66626 (Evidence)
DoTS	DT.101245603, DT.101263743, DT.101301284, DT.495957, DT.55221335, DT.97377348, DT.99862085
Consensus CDS Project	CCDS27925.1
International Mouse Knockout Project Status	Cdip1

Sequences

Length	Strain/Species
genomic	OTTMUSG00000026631	VEGA Gene Model | MGI Sequence Detail	39945	C57BL/6J
transcript	OTTMUST00000065933	VEGA | MGI Sequence Detail	3953	Not Applicable
polypeptide	OTTMUSP00000032930	VEGA | MGI Sequence Detail	208	Not Applicable

All sequences(53) RefSeq(2) UniProt(2)

Polymorphisms

SNPs(72 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR006629	LPS-induced tumor necrosis factor alpha factor

References

(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:156017 Yokoyama S, et al., A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58. Dev Cell. 2009 Dec;17(6):836-48
All references(30)

Other accession IDs

MGI:1919832, MGI:2146549, MGI:2146673