About   Help   FAQ
Mcts2 Gene Detail
Summary
  • Symbol
    Mcts2
  • Name
    malignant T cell amplified sequence 2
  • Synonyms
    2400002F11Rik, MGC:41042
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913655
    NCBI Gene: 66405
  • Alliance
    gene page
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:152529091-152529871 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 75.41 cM, cytoband H2
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    46 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913655
 protein coding gene Chr2:152528955-152529871 (+)
129S1/SvImJ MGP_129S1SvImJ_G0026675
 protein coding gene Chr2:157259550-157260485 (+)
A/J MGP_AJ_G0026641
 protein coding gene Chr2:150980787-150981703 (+)
AKR/J MGP_AKRJ_G0026611
 protein coding gene Chr2:155382971-155383887 (+)
BALB/cJ MGP_BALBcJ_G0026650
 protein coding gene Chr2:151290455-151291693 (+)
C3H/HeJ MGP_C3HHeJ_G0026393
 protein coding gene Chr2:155768379-155769314 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027099
 protein coding gene Chr2:161823923-161824839 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024470
 protein coding gene Chr2:144571489-144572400 (+)
CAST/EiJ MGP_CASTEiJ_G0025854
 protein coding gene Chr2:156020636-156021571 (+)
CBA/J MGP_CBAJ_G0026371
 protein coding gene Chr2:167780131-167781066 (+)
DBA/2J MGP_DBA2J_G0026507
 protein coding gene Chr2:150194467-150195402 (+)
FVB/NJ MGP_FVBNJ_G0026473
 protein coding gene Chr2:148647366-148648301 (+)
LP/J MGP_LPJ_G0026611
 protein coding gene Chr2:157413928-157417760 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0026494
 protein coding gene Chr2:171868025-171868941 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0027155
 protein coding gene Chr2:155275629-155276564 (+)
PWK/PhJ MGP_PWKPhJ_G0025588
 protein coding gene Chr2:149714630-149715541 (+)
SPRET/EiJ MGP_SPRETEiJ_G0025391
 protein coding gene Chr2:154124177-154125111 (+)
WSB/EiJ MGP_WSBEiJ_G0025924
 protein coding gene Chr2:156188502-156189437 (+)



Homology
more
  • Human Ortholog
    MCTS2, MCTS family member 2
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MCTS2, MCTS family member 2
  • Synonyms
    MCTS2P, PSIMCT-1
  • Links
    NCBI Gene ID: 100101490
    UniProt: A0A3B3IRV3

  • Chr Location
    20q11.21; chr20:31547379-31548081 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    789
  • Tissues
    38
  • cDNA Data
    19
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66405 NCBI Gene Model | MGI Sequence Detail 781 C57BL/6J ±  kb
transcript NM_025543 RefSeq | MGI Sequence Detail 781 C57BL/6  
polypeptide Q9CQ21 UniProt | EBI | MGI Sequence Detail 181 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 22
    cDNA 19
    Primer pair 2
    Other 1

    Microarray probesets 3
References
more
  • Summaries
    All 29
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 6
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:316283 Huang Z, et al., Spatiotemporal expression of retrogene-host pair Mcts2/H13 in mouse embryo, and Mcts2 has no influence on H13 transcription pattern in NIH/3T3 cells. Acta Histochem. 2014 Mar;116(2):312-8
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory