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Mcts2 Gene Detail
Summary
  • Symbol
    Mcts2
  • Name
    malignant T cell amplified sequence 2
  • Synonyms
    2400002F11Rik, MGC:41042
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913655
    NCBI Gene: 66405
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:152687148-152687946 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 75.41 cM, cytoband H2
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    46 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913655
protein coding gene Chr2:152687035-152687946 (+)
129S1/SvImJ MGP_129S1SvImJ_G0026675
protein coding gene Chr2:157259550-157260485 (+)
A/J MGP_AJ_G0026641
protein coding gene Chr2:150980787-150981703 (+)
AKR/J MGP_AKRJ_G0026611
protein coding gene Chr2:155382971-155383887 (+)
BALB/cJ MGP_BALBcJ_G0026650
protein coding gene Chr2:151290455-151291693 (+)
C3H/HeJ MGP_C3HHeJ_G0026393
protein coding gene Chr2:155768379-155769314 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027099
protein coding gene Chr2:161823923-161824839 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024470
protein coding gene Chr2:144571489-144572400 (+)
CAST/EiJ MGP_CASTEiJ_G0025854
protein coding gene Chr2:156020636-156021571 (+)
CBA/J MGP_CBAJ_G0026371
protein coding gene Chr2:167780131-167781066 (+)
DBA/2J MGP_DBA2J_G0026507
protein coding gene Chr2:150194467-150195402 (+)
FVB/NJ MGP_FVBNJ_G0026473
protein coding gene Chr2:148647366-148648301 (+)
LP/J MGP_LPJ_G0026611
protein coding gene Chr2:157413928-157417760 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0026494
protein coding gene Chr2:171868025-171868941 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0027155
protein coding gene Chr2:155275629-155276564 (+)
PWK/PhJ MGP_PWKPhJ_G0025588
protein coding gene Chr2:149714630-149715541 (+)
SPRET/EiJ MGP_SPRETEiJ_G0025391
protein coding gene Chr2:154124177-154125111 (+)
WSB/EiJ MGP_WSBEiJ_G0025924
protein coding gene Chr2:156188502-156189437 (+)



Homology
more
  • Human Ortholog
    MCTS2P, MCTS family member 2, pseudogene
  • Vertebrate Orthologs
    5
  • Human Ortholog
    MCTS2P, MCTS family member 2, pseudogene
    Orthology source: HGNC
  • Synonyms
    MCTS2, PSIMCT-1
  • Links
    NCBI Gene ID: 100101490

  • Chr Location
    20q11.21; chr20:31547175-31548177 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66405 NCBI Gene Model | MGI Sequence Detail 799 C57BL/6J ±  kb
transcript NM_025543 RefSeq | MGI Sequence Detail 799 C57BL/6  
polypeptide Q9CQ21 UniProt | EBI | MGI Sequence Detail 181 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 19
    cDNA 19

    Microarray probesets 3
References
more
  • Summaries
    All 28
    Gene Ontology 3
    Phenotypes 6
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/11/2019
MGI 6.14
The Jackson Laboratory