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Aaed1
Gene Detail
Symbol

Name
ID
Aaed1
AhpC/TSA antioxidant enzyme domain containing 1
MGI:1913379
Synonyms
1110018J18Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 13
33.26 cM, cytoband B3
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr13:64291836-64312710 bp, - strand
From Ensembl annotation of GRCm38

  20875 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:7192  Vertebrate Homology Class
1 human; 1 mouse; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Aaed1

Human
homologs
Human Homolog AAED1, AhpC/TSA antioxidant enzyme domain containing 1
NCBI Gene ID 195827
neXtProt AC  NX_Q7RTV5
Human Synonyms  C9orf21
Human Chr (Location)  9q22.32; chr9:96640827-96655317 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Gene trapped(3) Targeted(2)
Interactions
Aaed1 interacts with 28 markers (Mir19a, Mir22, Mir33, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(48)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(50) cDNA(48) Other(2)
Microarray probesets(3)
Other database
links
Ensembl Gene ModelENSMUSG00000021482 (Evidence)
Entrez Gene66129 (Evidence)
UniGene491110
DFCITC1756870, TC1582835
DoTSDT.91339854, DT.529924, DT.55100087
NIA Mouse Gene IndexU034909
Consensus CDS ProjectCCDS26599.1
International Mouse Knockout Project StatusAaed1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000021482 Ensembl Gene Model | MGI Sequence Detail 20875 C57BL/6J ±  kb
transcript ENSMUST00000021938 Ensembl | MGI Sequence Detail 972 Not Applicable 
polypeptide ENSMUSP00000021938 Ensembl | MGI Sequence Detail 226 Not Applicable 

For the selected sequences
All sequences(45) RefSeq(16) UniProt(7)
Polymorphisms
SNPs within 2kb(304 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR012336 Thioredoxin-like fold
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(28)
Other
accession IDs
MGI:2145300

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory