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Aaed1
Gene Detail
Symbol

Name
ID
Aaed1
AhpC/TSA antioxidant enzyme domain containing 1
MGI:1913379
Synonyms
1110018J18Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 13
33.26 cM, cytoband B3
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr13:64291836-64312710 bp, - strand
From NCBI annotation of GRCm38

  20875 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:7192  Vertebrate Homology Class
1 human; 1 mouse; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: AAED1
Gene Tree: Aaed1

Human
homologs
AAED1, AhpC/TSA antioxidant enzyme domain containing 1
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 195827
neXtProt AC: NX_Q7RTV5

Human Synonyms: C9orf21

Human Chr (Location): 9q22.32; chr9:96641251-96655323 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Gene trapped(3) Targeted(2)
Interactions
Aaed1 interacts with 28 markers (Mir19a, Mir22, Mir33, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(48)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase aaed1    NEW 
Molecular
reagents
All nucleic(50) cDNA(48) Other(2)
Microarray probesets(3)
Other database
links
Ensembl Gene Model ENSMUSG00000021482 (Evidence)
Entrez Gene 66129 (Evidence)
UniGene 491110
DFCI TC1582835, TC1756870
DoTS DT.529924, DT.55100087, DT.91339854
NIA Mouse Gene Index U034909
Consensus CDS Project CCDS26599.1
International Mouse Phenotyping Consortium Status Aaed1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 66129 NCBI Gene Model | MGI Sequence Detail 20875 C57BL/6J ±  kb
transcript NM_025370 RefSeq | MGI Sequence Detail 972 C57BL/6 
polypeptide Q9D1A0 UniProt | EBI | MGI Sequence Detail 226 Not Applicable 

For the selected sequences
All sequences(28) RefSeq(2) UniProt(4)
Polymorphisms
SNPs within 2kb(304 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR012336 Thioredoxin-like fold
Graphical View of Protein Domain Structure
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(26)
Other
accession IDs
MGI:2145300

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/25/2015
MGI 6.0
The Jackson Laboratory