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1110006O24Rik Gene Detail
Summary
  • Symbol
    1110006O24Rik
  • Name
    RIKEN cDNA 1110006O24 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1913373
    NCBI Gene: 66123
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:115769108-115769875 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 56.10 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    9 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913373
 lncRNA gene Chr5:115769103-115769877 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006772
 lincRNA gene Chr5:118537744-118538511 (-)
A/J MGP_AJ_G0006766
 lincRNA gene Chr5:113809738-113810505 (-)
AKR/J MGP_AKRJ_G0006736
 lincRNA gene Chr5:117456307-117457074 (-)
BALB/cJ MGP_BALBcJ_G0006742
 lincRNA gene Chr5:115208894-115209661 (-)
C3H/HeJ MGP_C3HHeJ_G0006687
 lincRNA gene Chr5:117971858-117972625 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006907
 lincRNA gene Chr5:123090981-123091748 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006162
 lincRNA gene Chr5:108582735-108583495 (-)
CAST/EiJ MGP_CASTEiJ_G0006610
 lincRNA gene Chr5:116918856-116919619 (-)
CBA/J MGP_CBAJ_G0006669
 lincRNA gene Chr5:127818328-127819095 (-)
DBA/2J MGP_DBA2J_G0006689
 lincRNA gene Chr5:113898012-113898779 (-)
FVB/NJ MGP_FVBNJ_G0006713
 lincRNA gene Chr5:112716686-112717453 (-)
LP/J MGP_LPJ_G0006773
 lincRNA gene Chr5:119098699-119099466 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006697
 lincRNA gene Chr5:132118359-132119126 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006909
 lincRNA gene Chr5:116935870-116936637 (-)
PWK/PhJ MGP_PWKPhJ_G0006549
 lincRNA gene Chr5:112544596-112545356 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006455
 lincRNA gene Chr5:114478174-114478953 (-)
WSB/EiJ MGP_WSBEiJ_G0006661
 lincRNA gene Chr5:117530758-117531525 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    1
  • Gene trapped
    4
  • Radiation induced
    1
  • Genomic Mutations
    2 involving 1110006O24Rik
  • Find Mice (IMSR)
    1 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    7
Sequences &
Gene Models
less
  • All Sequences
    28
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 66123 NCBI Gene Model | MGI Sequence Detail 768 C57BL/6J ±  kb
transcript NR_027810 RefSeq | MGI Sequence Detail 768 C57BL/6  
polypeptide Q9JJ86 UniProt | EBI | MGI Sequence Detail 82 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 1
References
more
  • Summaries
    All 20
    Phenotypes 8
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory