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1110001J03Rik
Gene Detail
Symbol

Name
ID
1110001J03Rik
RIKEN cDNA 1110001J03 gene
MGI:1913367
Synonyms
Fmc1
Feature Type
protein coding gene
Genetic Map
Chromosome 6
17.84 cM, cytoband B1
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr6:38533502-38539449 bp, + strand
From VEGA annotation of GRCm38

  5948 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:41627  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 western clawed frog; 1 zebrafish

Gene Tree: 1110001J03Rik

Human
homologs
Human Homolog C7orf55, chromosome 7 open reading frame 55
NCBI Gene ID 154791
neXtProt AC  NX_Q96HJ9
Human Synonyms  FMC1
Human Chr (Location)  7q34; chr7:139340450-139346319 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(80) : Gene trapped(76) Targeted(4)
Interactions
1110001J03Rik interacts with 17 markers (Mir224, Mir302b, Mir302d, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component mitochondrion
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
cDNA source data(5)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(5) cDNA(5)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000024224 (Evidence)
Ensembl Gene ModelENSMUSG00000019689 (Evidence)
Entrez Gene66117 (Evidence)
DFCITC1578331
DoTSDT.101123932, DT.534320
NIA Mouse Gene IndexU006692
Consensus CDS ProjectCCDS20014.1
International Mouse Knockout Project Status1110001J03Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000024224 VEGA Gene Model | MGI Sequence Detail 5948 C57BL/6J ±  kb
transcript OTTMUST00000059279 VEGA | MGI Sequence Detail 479 Not Applicable 
polypeptide OTTMUSP00000028825 VEGA | MGI Sequence Detail 113 Not Applicable 

For the selected sequences
All sequences(21) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(38 from dbSNP Build 137)
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(30)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
10/21/2014
MGI 5.20
The Jackson Laboratory