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Cystm1
Gene Detail
 Symbol
Name
ID
Cystm1
cysteine-rich transmembrane module containing 1
MGI:1913310
Synonyms 0610010O12Rik
Feature Type protein coding gene
Genetic Map
Chromosome 18
19.46 cM, cytoband B3
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr18:36345619-36402980 bp, + strand
From VEGA annotation of GRCm38

  57362 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
Gene Tree: Cystm1
Mutations,
alleles, and
phenotypes
All mutations/alleles(49) : Gene trapped(46) Targeted(3)
Incidental mutations (data from APF )
Interactions
Cystm1 interacts with 99 markers (Mir9-1, Mir9-2, Mir9-3, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process biological_process
Component integral component of membrane, membrane
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(90)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(90) cDNA(90)
Microarray probesets(6)
Other database
links
VEGA Gene ModelOTTMUSG00000032601 (Evidence)
Ensembl Gene ModelENSMUSG00000046727 (Evidence)
Entrez Gene66060 (Evidence)
UniGene272527
DFCITC1575078, TC1604238, TC1719598
DoTSDT.101162537, DT.101364233, DT.40176699, DT.94156648
NIA Mouse Gene IndexU018588
Consensus CDS ProjectCCDS37770.1
International Mouse Knockout Project StatusCystm1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000032601 VEGA Gene Model | MGI Sequence Detail 57362 C57BL/6J ±  kb
transcript OTTMUST00000081073 VEGA | MGI Sequence Detail 445 Not Applicable 
polypeptide OTTMUSP00000051887 VEGA | MGI Sequence Detail 106 Not Applicable 

For the selected sequences
All sequences(45) RefSeq(2) UniProt(4)
Polymorphisms SNPs within 2kb(148 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
Protein Ontology PR:000030764 cysteine-rich and transmembrane domain-containing protein 1
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
All references(33)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/02/2014
MGI 5.19
The Jackson Laboratory