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Krcc1 Gene Detail
Summary
  • Symbol
    Krcc1
  • Name
    lysine-rich coiled-coil 1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1889377
    NCBI Gene: 57896
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:71271677-71285319 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 32.14 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    80 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1889377
protein coding gene Chr6:71271677-71286825 (+)
129S1/SvImJ MGP_129S1SvImJ_G0030855
protein coding gene Chr6:71738288-71753233 (+)
A/J MGP_AJ_G0030825
protein coding gene Chr6:68982112-68995754 (+)
AKR/J MGP_AKRJ_G0030754
protein coding gene Chr6:70962412-70976048 (+)
BALB/cJ MGP_BALBcJ_G0030836
protein coding gene Chr6:69016026-69029648 (+)
C3H/HeJ MGP_C3HHeJ_G0030877
protein coding gene Chr6:113273893-113287506 (-)
C57BL/6NJ MGP_C57BL6NJ_G0031294
protein coding gene Chr6:73634206-73648650 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0028483
protein coding gene Chr6:68168536-68182452 (+)
CAST/EiJ MGP_CASTEiJ_G0029944
protein coding gene Chr6:70824218-70839323 (+)
CBA/J MGP_CBAJ_G0030523
protein coding gene Chr6:76552845-76566478 (+)
DBA/2J MGP_DBA2J_G0030675
protein coding gene Chr6:68356175-68369799 (+)
FVB/NJ MGP_FVBNJ_G0030628
protein coding gene Chr6:67727089-67740953 (+)
LP/J MGP_LPJ_G0030754
protein coding gene Chr6:71668762-71682402 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0030663
protein coding gene Chr6:80051646-80066423 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0031320
protein coding gene Chr6:70805403-70819046 (+)
PWK/PhJ MGP_PWKPhJ_G0029660
protein coding gene Chr6:67229840-67243641 (+)
SPRET/EiJ MGP_SPRETEiJ_G0029488
protein coding gene Chr6:69519121-69533059 (+)
WSB/EiJ MGP_WSBEiJ_G0030026
protein coding gene Chr6:71148516-71162327 (+)



Homology
more
  • Human Ortholog
    KRCC1, lysine rich coiled-coil 1
  • Vertebrate Orthologs
    6
  • Human Ortholog
    KRCC1, lysine rich coiled-coil 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CHBP2
  • Links
    NCBI Gene ID: 51315
    neXtProt AC: NX_Q9NPI7
    UniProt: Q9NPI7

  • Chr Location
    2p11.2; chr2:88027203-88055801 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000053012 Ensembl Gene Model | MGI Sequence Detail 13643 C57BL/6J ±  kb
transcript ENSMUST00000168700 Ensembl | MGI Sequence Detail 1749 Not Applicable  
polypeptide ENSMUSP00000130252 Ensembl | MGI Sequence Detail 256 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 62
    cDNA 62

    Microarray probesets 4
References
more
  • Summaries
    All 25
    Phenotypes 6
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/26/2020
MGI 6.15
The Jackson Laboratory