About   Help   FAQ
Atp11c
Gene Detail
 Symbol
Name
ID
Atp11c
ATPase, class VI, type 11C
MGI:1859661
Synonyms A330005H02Rik, Ig
Feature Type protein coding gene
Genetic Map
Chromosome X
33.50 cM, cytoband A5
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
ChrX:60223290-60592698 bp, - strand
From VEGA annotation of GRCm38

  369409 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:27862  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Atp11c

Human
homologs
Human Homolog ATP11C, ATPase, Class VI, type 11C
NCBI Gene ID 286410
neXtProt AC  NX_Q8NB49
Human Synonyms  ATPIG, ATPIQ
Human Chr (Location)  Xq27.1; chrX:139726346-139933033 (-)  GRCh38
Alleles
and
phenotypes
All alleles(10) : Chemically induced (ENU)(4) Gene trapped(4) Targeted(2)
Incidental mutations (data from APF )
 
Mice homozygous or hemizugous for an ENU mutation exhibit decreased B cells associated with arrested adult B cell lymphopoiesis.
 
Phenotype Images(7)
Gene Ontology
(GO)
classifications
All GO classifications: (24 annotations)
Process cation transport, lipid transport, ...
Component endoplasmic reticulum, integral component of membrane, ...
Function ATP binding, cation-transporting ATPase activity, ...
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (28)    Tissues (3)    Images (20)
Theiler Stages: 23
Assay TypeResults
RNA in situ 28
cDNA source data(16)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(16) cDNA(16)
Microarray probesets(6)
Other database
links
VEGA Gene ModelOTTMUSG00000017557 (Evidence)
Ensembl Gene ModelENSMUSG00000062949 (Evidence)
Entrez Gene320940 (Evidence)
DFCITC1578173, TC1608437, TC1641410, TC1680984, TC1771252
DoTSDT.101149325, DT.101734364, DT.103572384, DT.111029860, DT.94250410
NIA Mouse Gene IndexU039413
EC3.6.3.1
Consensus CDS ProjectCCDS40987.1, CCDS40988.1
International Mouse Knockout Project StatusAtp11c
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000017557 VEGA Gene Model | MGI Sequence Detail 369409 C57BL/6J ±  kb
transcript OTTMUST00000042662 VEGA | MGI Sequence Detail 6039 Not Applicable 
polypeptide OTTMUSP00000019171 VEGA | MGI Sequence Detail 1129 Not Applicable 

For the selected sequences
All sequences(67) RefSeq(20) UniProt(3)
Polymorphisms SNPs within 2kb(659 from dbSNP Build 137)    SNPs within 2kb including multiple locations(667)
Protein-related
information
ResourceIDDescription
InterPro IPR001757 Cation-transporting P-type ATPase
InterPro IPR023214 HAD-like domain
InterPro IPR006539 Phospholipid-transporting P-type ATPase, subfamily IV
InterPro IPR008250 P-type ATPase, A domain
InterPro IPR023299 P-type ATPase, cytoplasmic domain N
InterPro IPR018303 P-type ATPase, phosphorylation site
Protein Ontology PR:000029288 phospholipid-transporting ATPase IG
References (Earliest) J:59384 Halleck MS, et al., Differential expression of putative transbilayer amphipath transporters. Physiol Genomics. 1999 Nov 11;1(3):139-50
(Latest) J:185495 Arnold CN, et al., A forward genetic screen reveals roles for Nfkbid, Zeb1, and Ruvbl2 in humoral immunity. Proc Natl Acad Sci U S A. 2012 Jul 3;
All references(42)
Other
accession IDs
MGI:2147864, MGI:2445086

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
07/15/2014
MGI 5.18
The Jackson Laboratory