Vmn1r49
Gene Detail

Symbol Name ID

Vmn1r49 vomeronasal 1, receptor 49 MGI:1344384

Synonyms

V1r5, V1rb2, VRi2

Feature Type

protein coding gene

Genetic Map

Chromosome 6

40.02 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)

Sequence Map

Chr6:90072086-90073018 bp, - strand From VEGA annotation of GRCm38   933 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:113975  Vertebrate Homology Class
7 mouse; 2 rat

Protein SuperFamily: pheromone receptor VN3t
Gene Tree: Vmn1r49

Alleles and phenotypes

All alleles(4) : Targeted(4)
 

Mice homozygous for a non-functional knock-in allele display abnormal patterns of axonal projections in the accessory olfactory bulb.

 

Gene Ontology (GO) classifications

All GO classifications: (13 annotations)

Process	G-protein coupled receptor signaling pathway, response to pheromone, ...
Component	integral to membrane, membrane, ...
Function	G-protein coupled receptor activity, pheromone receptor activity, ...

External Resources: FuncBase

Expression

Literature Summary: (1 records)
External Resources: GEO   ArrayExpress

Molecular reagents

All nucleic(1) Other(1)
Microarray probesets(2)

Other database links

VEGA Gene Model	OTTMUSG00000037450 (Evidence)
Ensembl Gene Model	ENSMUSG00000095932 (Evidence)
Entrez Gene	24112 (Evidence)
UniGene	89985
DoTS	DT.91331521
Consensus CDS Project	CCDS20351.1
International Mouse Knockout Project Status	Vmn1r49

Sequences

Length	Strain/Species
genomic	OTTMUSG00000037450	VEGA Gene Model | MGI Sequence Detail	933	C57BL/6J
transcript	OTTMUST00000096602	VEGA | MGI Sequence Detail	933	Not Applicable
polypeptide	OTTMUSP00000053985	VEGA | MGI Sequence Detail	310	Not Applicable

All sequences(14) RefSeq(2) UniProt(1)

Polymorphisms

SNPs(23 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR017452	GPCR, rhodopsin-like, 7TM
InterPro	IPR004072	Vomeronasal receptor, type 1
Protein Ontology	PR:000017241	vomeronasal type-1 receptor B2

References

(Earliest) J:54814 Rodriguez I, et al., Variable patterns of axonal projections of sensory neurons in the mouse vomeronasal system. Cell. 1999 Apr 16;97(2):199-208
(Latest) J:150929 Young J, et al., Extreme variability among mammalian V1R gene families. Genome Biol Evol. 2009;
All references(23)