About   Help   FAQ
Taf1 Gene Detail
Summary
  • Symbol
    Taf1
  • Name
    TATA-box binding protein associated factor 1
  • Synonyms
    B430306D02Rik, Ccg1, Ccg-1, KAT4, Taf2a
  • Feature Type
    protein coding gene
  • IDs
    MGI:1336878
    NCBI Gene: 270627
  • Gene Overview
    MyGene.info: TAF1
  • Alliance
Location & Maps
more
  • Sequence Map
    ChrX:101532734-101601034 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      68301 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome X, 44.29 cM
  • Mapping Data
    16 experiments
Homology
more
  • Human Ortholog
    TAF1, TATA-box binding protein associated factor 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    TAF1, TATA-box binding protein associated factor 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    BA2R, CCG1, CCGS, DYT3, DYT3/TAF1, KAT4, MRXS33, NSCL2, N-TAF1, OF, P250, TAF2A, TAFII250, TAF(II)250, TAFII-250, XDP
  • Links
    NCBI Gene ID: 6872
    neXtProt AC: NX_P21675
    UniProt: P21675

  • Chr Location
    Xq13.1; chrX:71366220-71530525 (+)  GRCh38.p7

Human Diseases
more
  • Diseases
    1 with human TAF1 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000018200 VEGA Gene Model | MGI Sequence Detail 68301 C57BL/6J ±  kb
transcript OTTMUST00000051768 VEGA | MGI Sequence Detail 5954 Not Applicable  
polypeptide OTTMUSP00000024423 VEGA | MGI Sequence Detail 1893 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    119 from dbSNP Build 142
  • RFLP
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 126
    cDNA 125
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGD-MRK-1796, MGD-MRK-1797, MGI:2147953, MGI:88292
References
more
  • Summaries
    All 64
    Developmental Gene Expression 12
    Gene Ontology 12
    Phenotypes 2
  • Earliest
    J:12527 Derry JM, et al., Localization of the Ccg1 gene on the mouse X Chromosome. Cytogenet Cell Genet. 1989;51:988
  • Latest
    J:245730 Bardot P, et al., The TAF10-containing TFIID and SAGA transcriptional complexes are dispensable for early somitogenesis in the mouse embryo. Development. 2017 Oct 15;144(20):3808-3818

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
07/31/2018
MGI 6.12
The Jackson Laboratory