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Cd300lg Gene Detail
Summary
  • Symbol
    Cd300lg
  • Name
    CD300 molecule like family member G
  • Synonyms
    2310016B05Rik, Clm9, D11Ertd736e, nepmucin
  • Feature Type
    protein coding gene
  • IDs
    MGI:1289168
    NCBI Gene: 52685
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:102041511-102055617 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 65.48 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    78 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1289168
protein coding gene Chr11:102041509-102055620 (+)
129S1/SvImJ MGP_129S1SvImJ_G0019218
protein coding gene Chr11:104984267-104999205 (+)
A/J MGP_AJ_G0019186
protein coding gene Chr11:100552172-100566368 (+)
AKR/J MGP_AKRJ_G0019155
protein coding gene Chr11:103667758-103681948 (+)
BALB/cJ MGP_BALBcJ_G0019160
protein coding gene Chr11:101037667-101051814 (+)
C3H/HeJ MGP_C3HHeJ_G0018969
protein coding gene Chr11:103871105-103885196 (+)
C57BL/6NJ MGP_C57BL6NJ_G0019609
protein coding gene Chr11:108257496-108273188 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0017235
protein coding gene Chr11:97977471-97991588 (+)
CAST/EiJ MGP_CASTEiJ_G0018523
protein coding gene Chr11:104839333-104853391 (+)
CBA/J MGP_CBAJ_G0018938
protein coding gene Chr11:112729355-112743440 (+)
DBA/2J MGP_DBA2J_G0019050
protein coding gene Chr11:100078783-100092859 (+)
FVB/NJ MGP_FVBNJ_G0019040
protein coding gene Chr11:99605819-99620846 (+)
LP/J MGP_LPJ_G0019119
protein coding gene Chr11:105503064-105517170 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0019071
protein coding gene Chr11:112255809-112270013 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0019647
protein coding gene Chr11:104030521-104044715 (+)
PWK/PhJ MGP_PWKPhJ_G0018286
protein coding gene Chr11:101140514-101154601 (+)
SPRET/EiJ MGP_SPRETEiJ_G0018078
protein coding gene Chr11:103784899-103798938 (+)
WSB/EiJ MGP_WSBEiJ_G0018572
protein coding gene Chr11:104011559-104026247 (+)



Homology
more
  • Human Ortholog
    CD300LG, CD300 molecule like family member g
  • Vertebrate Orthologs
    7
  • Human Ortholog
    CD300LG, CD300 molecule like family member g
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CLM9, CLM-9, NEPMUCIN, TREM4, TREM-4
  • Links
    NCBI Gene ID: 146894
    neXtProt AC: NX_Q6UXG3
    UniProt: Q6UXG3

  • Chr Location
    17q21.31; chr17:43846777-43863639 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    3 phenotypes from 2 alleles in 2 genetic backgrounds
    10 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Phenotypic analysis of mice homozygous for a targeted allele indicates that this mutation shows no notable phenotype in any parameter tested.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 52685 NCBI Gene Model | MGI Sequence Detail 14107 C57BL/6J ±  kb
transcript NM_001160711 RefSeq | MGI Sequence Detail 2732 C57BL/6  
polypeptide Q1ERP8 UniProt | EBI | MGI Sequence Detail 331 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    2 Sequences
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR003599 Immunoglobulin subtype
    IPR013106 Immunoglobulin V-set domain
Molecular
Reagents
less
  • All nucleic 22
    Genomic 2
    cDNA 19
    Primer pair 1

    Microarray probesets 4
Other
Accession IDs
less
MGI:1919142
References
more
  • Summaries
    All 36
    Gene Ontology 2
    Phenotypes 10
  • Earliest
    J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
  • Latest
    J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory