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Atp5f1
Gene Detail
Symbol

Name
ID
Atp5f1
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1
MGI:1100495
Synonyms
C76477
Feature Type
protein coding gene
Genetic Map
Chromosome 3
46.46 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr3:105942698-105960099 bp, - strand
From VEGA annotation of GRCm38

  17402 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:1275  Vertebrate Homology Class
1 human; 1 mouse; 2 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Protein SuperFamily: F-type ATP synthase, subunit b/4, eukaryotic mitochondria type
Gene Tree: Atp5f1

Human
homologs
Human Homolog ATP5F1, ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
NCBI Gene ID 515
neXtProt AC  NX_P24539
Human Synonyms  PIG47
Human Chr (Location)  1p13.2; chr1:111448845-111461918 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(23) : Gene trapped(20) Targeted(3)
Incidental mutations (data from Mutagenetix )
Interactions
Atp5f1 interacts with 177 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (2 records)
Data Summary: Results (101)    Tissues (98)    Images (16)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 94
Northern blot 7
cDNA source data(29)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(30) cDNA(30)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000027098 (Evidence)
Ensembl Gene ModelENSMUSG00000000563 (Evidence)
Entrez Gene11950 (Evidence)
DFCITC1685823, TC1592424, TC1573892, TC1592870
DoTSDT.99866141, DT.97373728, DT.94399887, DT.496439, DT.40136553, DT.103573432, DT.101373438, DT.101147179, DT.101720574, DT.97381600
NIA Mouse Gene IndexU024479, U003700
Consensus CDS ProjectCCDS17714.1
International Mouse Knockout Project StatusAtp5f1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000027098 VEGA Gene Model | MGI Sequence Detail 17402 C57BL/6J ±  kb
transcript OTTMUST00000067024 VEGA | MGI Sequence Detail 1604 Not Applicable 
polypeptide OTTMUSP00000033672 VEGA | MGI Sequence Detail 256 Not Applicable 

For the selected sequences
All sequences(83) RefSeq(4) UniProt(13)
Polymorphisms
SNPs within 2kb(160 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR013837 ATPase, F0 complex, B chain/subunit B
InterPro IPR008688 ATPase, F0 complex, B chain/subunit B/MI25
Protein Ontology PR:000004458 ATP synthase subunit b, mitochondrial
References
(Earliest) J:26127 Babalola GO, et al., Modulation of gene expression in the preimplantation mouse embryo by TGF-alpha and TGF-beta. Mol Reprod Dev. 1995 Jun;41(2):133-9
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(45)
Other
accession IDs
MGI:2140039

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory