Krt13
Gene Detail

Symbol Name ID

Krt13 keratin 13 MGI:101925

Synonyms

K13, Krt-1.13, Krt1-13

Feature Type

protein coding gene

Genetic Map

Chromosome 11

63.41 cM
Detailed Genetic Map ± 1 cM


Mapping data(4)

Sequence Map

Chr11:100117327-100121566 bp, - strand From VEGA annotation of GRCm38   4240 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:40740  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog

Gene Tree: Krt13

Human homologs

Human Homolog		KRT13, keratin 13
NCBI Gene ID		3860
neXtProt AC		NX_P13646
Human Synonyms		CK13, K13
Human Chr (Location)		17q12-q21.2; chr17:39657233-39661865 (-)  GRCh37.p10
Disease Associations		(1) Diseases Associated with Human KRT13

Alleles and phenotypes

All alleles(4) : Targeted(3) Gene trapped(1)

Gene Ontology (GO) classifications

All GO classifications: (6 annotations)

Component	extracellular vesicular exosome, intermediate filament, ...
Function	protein binding, structural molecule activity

External Resources: FuncBase

Expression

Literature Summary: (6 records)
Data Summary: Results (139)    Tissues (22)    Images (22)
Theiler Stages: 23

Assay Type	Results
RNA in situ	139

cDNA source data(29)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(39) Genomic(8) cDNA(31)
Microarray probesets(5)

Other database links

VEGA Gene Model	OTTMUSG00000002539 (Evidence)
Ensembl Gene Model	ENSMUSG00000044041 (Evidence)
Entrez Gene	16663 (Evidence)
UniGene	4646
DFCI	TC1578459, TC1598508
DoTS	DT.60141856, DT.94311113
Consensus CDS Project	CCDS25409.1
International Mouse Knockout Project Status	Krt13

Sequences

Length	Strain/Species
genomic	OTTMUSG00000002539	VEGA Gene Model | MGI Sequence Detail	4240	C57BL/6J
transcript	OTTMUST00000004964	VEGA | MGI Sequence Detail	1654	Not Applicable
polypeptide	OTTMUSP00000002390	VEGA | MGI Sequence Detail	437	Not Applicable

All sequences(28) RefSeq(2) UniProt(2)

Polymorphisms

SNPs(41 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR016044	Filament
InterPro	IPR001664	Intermediate filament protein
InterPro	IPR018039	Intermediate filament protein, conserved site
InterPro	IPR002957	Keratin, type I
Protein Ontology	PR:000009453	keratin, type I cytoskeletal 13

References

(Earliest) J:22955 Knapp B, et al., Nonepidermal members of the keratin multigene family: cDNA sequences and in situ localization of the mRNAs. Nucleic Acids Res. 1986 Jan 24;14(2):751-63
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(44)

Other accession IDs

MGD-MRK-11631, MGD-MRK-18756