Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  15
• Reference
  J:37837 Pingault V, et al., Human homology and candidate genes for the Dominant megacolon locus, a mouse model of Hirschsprung disease. Genomics. 1997 Jan 1;39(1):86-9
• ID
  MGI:48105

Genes

Gene	Assay Type	Description
D15Mit144	reported elsewhere
Ly6e	PCR amplified length variant	Ly67-pA, Ly67-pB
D15Mit28	reported elsewhere
D15Mit68	reported elsewhere
Sox10	visible phenotype
Sstr3	PCR amplified length variant	Smstr3-pA, Smstr3-pB
D15Mit1	reported elsewhere
D15Mit71	reported elsewhere
Pdgfb	PCR amplified length variant	Pdgfb-pA, Pdgfb-pB
Atf4	PCR amplified length variant	Atf4-pA, Atf4-pB
D15Mit2	reported elsewhere
D15Mit107	reported elsewhere

Notes

• Reference
  Authors use Tsa1 for locus symbol Ly67.

CROSS

• Type
  Backcross, sexes unspecified or combined
• Female Parent
  <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>
• Strain
  (C57BL/6JLe x C3HeB/FeJLe)F1-Sox10
• Male Parent
  <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>
• Strain
  C57BL/6J
• Allele 1
  b from C57BL/6JLe
• Allele 2
  c from C3HeB/FeJLe

2x2 Data Reported

Marker 1	Marker 2	# Recombinants	# Parentals
D15Mit144	Ly6e	3	218
D15Mit144	D15Mit28	3	218
Ly6e	D15Mit68	2	250
D15Mit28	D15Mit68	2	250
D15Mit68	Sox10	1	251
D15Mit68	Sstr3	1	251
D15Mit68	Pdgfb	1	251
D15Mit68	D15Mit1	1	251
D15Mit68	D15Mit71	1	251
Sox10	Atf4	1	251
Sox10	D15Mit2	1	251
Sstr3	Atf4	1	251
Sstr3	D15Mit2	1	251
Pdgfb	Atf4	1	251
Pdgfb	D15Mit2	1	251
D15Mit1	Atf4	1	251
D15Mit1	D15Mit2	1	251
D15Mit71	Atf4	1	251
D15Mit71	D15Mit2	1	251
Atf4	D15Mit107	4	248
D15Mit2	D15Mit107	4	248

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
D15Mit144	Ly6e	3	221	1.357	0.778
D15Mit144	D15Mit28	3	221	1.357	0.778
Ly6e	D15Mit68	2	252	0.794	0.559
D15Mit28	D15Mit68	2	252	0.794	0.559
D15Mit68	Sox10	1	252	0.397	0.396
D15Mit68	Sstr3	1	252	0.397	0.396
D15Mit68	Pdgfb	1	252	0.397	0.396
D15Mit68	D15Mit1	1	252	0.397	0.396
D15Mit68	D15Mit71	1	252	0.397	0.396
Sox10	Atf4	1	252	0.397	0.396
Sox10	D15Mit2	1	252	0.397	0.396
Sstr3	Atf4	1	252	0.397	0.396
Sstr3	D15Mit2	1	252	0.397	0.396
Pdgfb	Atf4	1	252	0.397	0.396
Pdgfb	D15Mit2	1	252	0.397	0.396
D15Mit1	Atf4	1	252	0.397	0.396
D15Mit1	D15Mit2	1	252	0.397	0.396
D15Mit71	Atf4	1	252	0.397	0.396
D15Mit71	D15Mit2	1	252	0.397	0.396
Atf4	D15Mit107	4	252	1.587	0.787
D15Mit2	D15Mit107	4	252	1.587	0.787