About   Help   FAQ
Mapping Data
Experiment
  • Experiment
    CROSS
  • Chromosome
    2
  • Reference
    J:38089 Pilz A, et al., High resolution genetic linkage analysis of mouse Chromosome 2 in the region of homology with human Chromosome 9. Mouse Genome. 1996;94(4):877-9
  • ID
    MGI:48010
Genes
GeneAlleleAssay TypeDescription
Abl1 Southern analysis Abl probe1
Ak1 Southern analysis Ak1 probe1
Ass1 Southern analysis Ass1 probe1
Abca2 Southern analysis Abc2 probe1
Cel Southern analysis Cel cDNA1
Col5a1 Southern analysis Col5a1 probe1
Hc Southern analysis Hc probe1
C8g Southern analysis C8g cDNA2
D2H9S10E Southern analysis D2H9S10E cDNA1
D2H9S114E Southern analysis D2H9S114E cDNA1
Nup214 Southern analysis D2H9S46E cDNA1
Dbh Southern analysis Dbh probe1
Eng Southern analysis Eng cDNA2
Stom Southern analysis Epb7.2 probe1
Fpgs Southern analysis Fpgs probe2
Ggta1 Southern analysis Ggta1 genomic1
Gsn Southern analysis Gsn probe1
Hspa5 Southern analysis Grp78 probe1
Grin1 Southern analysis Grin1 probe1
Notch1 Southern analysis Notch1 probe2
Pbx3 Southern analysis Pbx3 probe2
Ptgds Southern analysis Ptgds cDNA1
Rxra Southern analysis Rxra probe1
Sptan1 Southern analysis Spna2 probe1
Surf1 Southern analysis Surf1 probe1
Vav2 Southern analysis Vav2 probe1
D2Mit6 reported elsewhere
D2Mit11 reported elsewhere
Notes
  • Experiment
    Offspring types indicate alleles inherited from F1 parent.
CROSS
  • Type
    Backcross, female
  • Female Parent
    <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>
  • Strain
    (C57BL/6J x SPR or SEG/Pas)F1
  • Male Parent
    <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>/<s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>
  • Strain
    SPR or SEG/Pas
  • Mapping Panel
  • Allele 1
    b from C57BL/6J
  • Allele 2
    s from SPR or SEG/Pas
2x2 Data Reported
Marker 1 Marker 2 # Recombinants # Parentals
D2Mit6 Grin1 12 845
Grin1 C8g 1 856
C8g Abca2 1 856
Abca2 Ptgds 1 856
Ptgds Notch1 14 843
Notch1 Vav2 1 856
Vav2 Dbh 1 856
Vav2 Surf1 1 856
Vav2 D2H9S10E 1 856
Dbh D2H9S114E 3 854
Surf1 D2H9S114E 3 854
D2H9S10E D2H9S114E 3 854
D2H9S114E Rxra 1 856
D2H9S114E Col5a1 1 856
Rxra Cel 1 856
Col5a1 Cel 1 856
Cel Sptan1 5 852
Sptan1 Ass1 3 854
Ass1 Nup214 1 856
Ass1 Abl1 1 856
C8g Fpgs 1 856
Abl1 Fpgs 1 856
Fpgs Eng 1 856
Eng Ak1 1 856
Ak1 Ptgds 2 855
Pbx3 Hspa5 1 856
Hspa5 Hc 3 854
Hc Stom 1 856
Stom Gsn 3 854
Gsn Ggta1 4 853
Ggta1 D2Mit11 137 740
D2Mit6 D2Mit11 199 658
Statistics
Marker 1 Marker 2 # Recombinants Total % Recombinants Std Error
D2Mit6 Grin1 12 857 1.400 0.401
Grin1 C8g 1 857 0.117 0.117
C8g Abca2 1 857 0.117 0.117
Abca2 Ptgds 1 857 0.117 0.117
Ptgds Notch1 14 857 1.634 0.433
Notch1 Vav2 1 857 0.117 0.117
Vav2 Dbh 1 857 0.117 0.117
Vav2 Surf1 1 857 0.117 0.117
Vav2 D2H9S10E 1 857 0.117 0.117
Dbh D2H9S114E 3 857 0.350 0.202
Surf1 D2H9S114E 3 857 0.350 0.202
D2H9S10E D2H9S114E 3 857 0.350 0.202
D2H9S114E Rxra 1 857 0.117 0.117
D2H9S114E Col5a1 1 857 0.117 0.117
Rxra Cel 1 857 0.117 0.117
Col5a1 Cel 1 857 0.117 0.117
Cel Sptan1 5 857 0.583 0.260
Sptan1 Ass1 3 857 0.350 0.202
Ass1 Nup214 1 857 0.117 0.117
Ass1 Abl1 1 857 0.117 0.117
C8g Fpgs 1 857 0.117 0.117
Abl1 Fpgs 1 857 0.117 0.117
Fpgs Eng 1 857 0.117 0.117
Eng Ak1 1 857 0.117 0.117
Ak1 Ptgds 2 857 0.233 0.165
Pbx3 Hspa5 1 857 0.117 0.117
Hspa5 Hc 3 857 0.350 0.202
Hc Stom 1 857 0.117 0.117
Stom Gsn 3 857 0.350 0.202
Gsn Ggta1 4 857 0.467 0.233
Ggta1 D2Mit11 137 877 15.621 1.226
D2Mit6 D2Mit11 199 857 23.221 1.442

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
07/09/2019
MGI 6.14
The Jackson Laboratory