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Mapping Data
Experiment
  • Experiment
    CROSS
  • Chromosome
    11
  • Reference
    J:31803 Baldacci PA, et al., A high-resolution map around the locus Om on mouse Chromosome 11. Mamm Genome. 1996 Feb;7(2):114-6
  • ID
    MGI:46275
Genes
GeneAlleleAssay TypeDescription
D11Mit34 PCR amplified length variant A1113
D11Mit94 PCR amplified length variant MPC165
D11Mit96 PCR amplified length variant MPC545
D11Mit144 PCR amplified length variant D1206
D11Mit118 PCR amplified length variant MPC781
D11Mit33 PCR amplified length variant B422
D11Mit93 PCR amplified length variant MPC1225
Ccl2 PCR amplified length variant Scya2-pA, Scya2-pB
Ccl1 PCR amplified length variant Scya1-pA, Scya1-pB
Om visible phenotype
D11Mit35 PCR amplified length variant D562
D11Mit36 PCR amplified length variant A653
D11Mit38 PCR amplified length variant D576
D11Mit39 PCR amplified length variant D575
Mpo PCR amplified length variant 114.MMMPO
Notes
  • Reference
    Authors indicated that Scya1 is a canidate gene for Om.
  • Experiment
    Offspring types indicate alleles inherited from F1 parent.
CROSS
  • Type
    Backcross, male
  • Female Parent
    <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d>/<d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d>
  • Strain
    BALB/cPas
  • Male Parent
    <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d> <d>/<c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c> <c>
  • Strain
    (BALB/cPas x DDK/Pas)F1
  • Allele 1
    c from BALB/cPas
  • Allele 2
    d from DDK/Pas
CROSS Data
MC #mice D11Mit34 D11Mit94 D11Mit96 D11Mit144 D11Mit118 D11Mit33 D11Mit93 Ccl2 Ccl1 Om D11Mit35 D11Mit36 D11Mit38 D11Mit39 Mpo
76 c c c c c c c c c c c c c c c
79 d d d d d d d d d d d d d d d
37 . c c c c c c c c c c c c c c
35 . d d d d d d d d d d d d d d
40 . . . . c c c c c c c c c c c
53 . . . . d d d d d d d d d d d
24 . . . . . . . . c c c c c c c
28 . . . . . . . . d d d d d d d
6 . . . . c c c c c c . . . . .
11 . . . . d d d d d d . . . . .
1 c d d d d d d d d d d d d d d
2 c c c c d d d d d d d d d d d
2 . c c c d d d d d d d d d d d
1 c c c c c d d d d d d d d d d
1 d d d d d c c c c c c c c c c
1 . d d d d c c c c c c c c c c
1 . c c c c c c c d d d d d d d
1 c c c c c c c c c c d d d d d
1 d d d d d d d d d d c c c c c
1 . c c c c c c c c c d d d d d
1 . . . . c c c c c c d d d d d
1 . . . . d d d d d d c c c c c
1 . . . . . . . . c c d d d d d
1 c c c c c c c c c c c c d d d
Statistics
Marker 1 Marker 2 # Recombinants Total % Recombinants Std Error
D11Mit34 D11Mit94 1 163 0.613 0.612
D11Mit94 D11Mit96 0 240 0.000 0.000
D11Mit96 D11Mit144 0 240 0.000 0.000
D11Mit144 D11Mit118 4 240 1.667 0.826
D11Mit118 D11Mit33 3 352 0.852 0.490
D11Mit33 D11Mit93 0 352 0.000 0.000
D11Mit93 Ccl2 0 352 0.000 0.000
Ccl2 Ccl1 1 352 0.284 0.284
Ccl1 Om 0 405 0.000 0.000
Om D11Mit35 6 388 1.546 0.626
D11Mit35 D11Mit36 0 388 0.000 0.000
D11Mit36 D11Mit38 1 388 0.258 0.257
D11Mit38 D11Mit39 0 388 0.000 0.000
D11Mit39 Mpo 0 388 0.000 0.000

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/01/2019
MGI 6.14
The Jackson Laboratory