Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  12
• Reference
  J:22176 Watanabe T, et al., Fine genetic mapping defines the genetic order of Pax9, Tcf3a, and Acrodysplasia (Adp). Mamm Genome. 1994 Dec;5(12):768-70
• ID
  MGI:44474

Genes

Gene	Assay Type	Description
D12Mit54	PCR amplified length variant	B590
D12Mit88	PCR amplified length variant	MPC1851
Pax9	Southern analysis	Pax9 cDNA1
Foxa1	Southern analysis	Hnf3a cDNA2
D12Nds1	PCR amplified length variant	T51
D12Mit36	PCR amplified length variant	B297
Mdga2	Southern analysis	clone 84
D12Mit34	PCR amplified length variant	B176
D12Mit4	PCR amplified length variant	A64

Notes

• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Strain
  (C57BL/6J x SPR or SEG/Pas)F1
• Strain
  SPR or SEG/Pas or C57BL/6J
• Mapping Panel
  EUCIB (both)
• Allele 1
  b from C57BL/6J
• Allele 2
  s from SPR or SEG/Pas or C57BL/6J

2x2 Data Reported

Marker 1	Marker 2	# Recombinants	# Parentals
D12Mit54	D12Mit88	9	988
D12Mit88	Pax9	7	990
Pax9	Foxa1	8	989
Foxa1	D12Nds1	9	988
D12Nds1	D12Mit36	5	992
D12Mit36	Mdga2	26	971
Mdga2	D12Mit34	8	989
D12Mit34	D12Mit4	45	952

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Mdga2	D12Mit34	8	997	0.802	0.283
D12Mit34	D12Mit4	45	997	4.514	0.657
D12Mit36	Mdga2	26	997	2.608	0.505
D12Mit54	D12Mit88	9	997	0.903	0.300
D12Mit88	Pax9	7	997	0.702	0.264
D12Nds1	D12Mit36	5	997	0.502	0.224
Pax9	Foxa1	8	997	0.802	0.283
Foxa1	D12Nds1	9	997	0.903	0.300