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Mapping Data
Experiment
  • Experiment
    CROSS
  • Chromosome
    1
  • Reference
    J:2183 Vidal SM, et al., Identification and mapping of six microdissected genomic DNA probes to the proximal region of mouse chromosome 1. Genomics. 1992 Sep;14(1):32-7
  • ID
    MGI:41072
Genes
GeneAlleleAssay TypeDescription
D1Mcg162 Southern analysis (lambda)Mm1C-162
Col3a1 reported elsewhere
Crygf reported elsewhere
D1Mcg163 Southern analysis (lambda)Mm1C-163
Fn1 reported elsewhere
Tnp1 reported elsewhere
D1Mcg165 Southern analysis (lambda)Mm1C-165
Vil1 reported elsewhere
Inha reported elsewhere
D1Mcg153 Southern analysis (lambda)Mm1c-153
D1Mcg156 Southern analysis (lambda)Mm1C-156
Pax3 reported elsewhere
Akp3 reported elsewhere
Chrng reported elsewhere
Col6a3 reported elsewhere
Sag reported elsewhere
D1Mcg150 Southern analysis (lambda)Mm1C-150
Ren1 reported elsewhere
Ren2 reported elsewhere
Notes
  • Reference
    For loci D1Mcg162, D1Mcg163, D1Mcg165, D1Mcg153, D1Mcg156, D1Mcg150 authors use (lambda)Mm1C-162, (lambda)Mm1C-163, (lambda)Mm1C-165, (lambda)Mm1C-153, (lambda)Mm1C-156 and (lambda)Mm1C-150 respectively.
  • Experiment
    Offspring types indicate alleles inherited from F1 parent.
CROSS
  • Type
    Backcross, female
  • Female Parent
    <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>
  • Strain
    (C57BL/6J x M. spretus)F1
  • Male Parent
    <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>
  • Strain
    C57BL/6J
  • Allele 1
    b from C57BL/6J
  • Allele 2
    s from M. spretus
CROSS Data
MC #mice D1Mcg162 Col3a1 Crygf D1Mcg163 Fn1 Tnp1 D1Mcg165 Vil1 Inha D1Mcg153 D1Mcg156 Pax3 Akp3 Chrng Col6a3 Sag D1Mcg150 Ren1 Ren2
23 s s s s s s s s s s s s s s s s s s s
35 b b b b b b b b b b b b b b b b b b b
6 s b b b b b b b b b b b b b b b b b b
3 b s s s s s s s s s s s s s s s s s s
5 s s b b b b b b b b b b b b b b b b b
4 b b s s s s s s s s s s s s s s s s s
0 s s s b b b b b b b b b b b b b b b b
1 b b b s s s s s s s s s s s s s s s s
1 s s s s b b b b b b b b b b b b b b b
1 b b b b s s s s s s s s s s s s s s s
2 s s s s s b b b b b b b b b b b b b b
0 b b b b b s s s s s s s s s s s s s s
0 s s s s s s b b b b b b b b b b b b b
1 b b b b b b s s s s s s s s s s s s s
0 s s s s s s s s b b b b b b b b b b b
1 b b b b b b b b s s s s s s s s s s s
1 s s s s s s s s s b b b b b b b b b b
2 b b b b b b b b b s s s s s s s s s s
2 s s s s s s s s s s b b b b b b b b b
2 b b b b b b b b b b s s s s s s s s s
1 s s s s s s s s s s s b b b b b b b b
0 b b b b b b b b b b b s s s s s s s s
3 s s s s s s s s s s s s b b b b b b b
2 b b b b b b b b b b b b s s s s s s s
0 s s s s s s s s s s s s s b b b b b b
1 b b b b b b b b b b b b b s s s s s s
1 s s s s s s s s s s s s s s b b b b b
1 b b b b b b b b b b b b b b s s s s s
0 s s s s s s s s s s s s s s s s b b b
2 b b b b b b b b b b b b b b b b s s s
10 s s s s s s s s s s s s s s s s s b b
8 b b b b b b b b b b b b b b b b b s s
1 s b s s s s s s s s s s s s s s s s s
1 b s b b b b b b b b b b b b b b b b b
1 s s b s s s s s s s s s s s s s s s s
2 s b b b b b b b b b b b b b b b b s s
1 b b b b b b b b b b b s s s s s s b b
Statistics
Marker 1 Marker 2 # Recombinants Total % Recombinants Std Error
D1Mcg162 Col3a1 13 125 10.400 2.730
Col3a1 Crygf 12 125 9.600 2.635
Crygf D1Mcg163 2 125 1.600 1.122
D1Mcg163 Fn1 2 125 1.600 1.122
Fn1 Tnp1 2 125 1.600 1.122
Tnp1 D1Mcg165 1 125 0.800 0.797
D1Mcg165 Vil1 0 125 0.000 0.000
Vil1 Inha 1 125 0.800 0.797
Inha D1Mcg153 3 125 2.400 1.369
D1Mcg153 D1Mcg156 4 125 3.200 1.574
D1Mcg156 Pax3 2 125 1.600 1.122
Pax3 Akp3 5 125 4.000 1.753
Akp3 Chrng 1 125 0.800 0.797
Chrng Col6a3 2 125 1.600 1.122
Col6a3 Sag 0 125 0.000 0.000
Sag D1Mcg150 2 125 1.600 1.122
D1Mcg150 Ren1 21 125 16.800 3.344
Ren1 Ren2 0 125 0.000 0.000

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/09/2024
MGI 6.23
The Jackson Laboratory