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Mapping Data
Experiment
  • Experiment
    CROSS
  • Chromosome
    18
  • Reference
    J:1701 Justice MJ, et al., A molecular genetic linkage map of mouse chromosome 18 reveals extensive linkage conservation with human chromosomes 5 and 18. Genomics. 1992 Aug;13(4):1281-8
  • ID
    MGI:40807
Genes
GeneAlleleAssay TypeDescription
Hc18 Southern analysis pMR196
Kif5b Southern analysis pXPE
Map3k8 Southern analysis pTP2
Ttr Southern analysis pHH64
Hk1-rs1 Southern analysis rHK-1
Apc Southern analysis MAPC 73-1A
D18Leh1 reported elsewhere
Fgf1 reported elsewhere
Nr3c1 reported elsewhere
Mcc Southern analysis MCC-MB56-1
Lmnb1 Southern analysis 77-553
Pdgfrb Southern analysis Pdgfrb cDNA
Csf1r reported elsewhere
Cd74 reported elsewhere
D18Fcr2 Southern analysis 748-7
Camk2a Southern analysis pk2a3
D18Leh2 reported elsewhere
Emb-rs3 Southern analysis p17P
Grp Southern analysis pB12
Gnal Southern analysis rga
Mtv38 reported elsewhere
Dcc Southern analysis pDCC 1.65
D18Fcr1 Southern analysis pAB7
Mbp reported elsewhere
Notes
  • Reference
    Revised gene symbols: Ttr, Hk1-rs1, Fgf-1 (formerly Palb, Hk-1rs1 and Fgfa, respectively).
  • Experiment
    Offspring types indicate alleles inherited from F1 parent.
CROSS
  • Type
    Backcross, female
  • Female Parent
    <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>
  • Strain
    (C57BL/6J x M. spretus)F1
  • Male Parent
    <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>
  • Strain
    C57BL/6J
  • Mapping Panel
  • Allele 1
    b from C57BL/6J
  • Allele 2
    s from M. spretus
CROSS Data
MC #mice Kif5b Ttr Apc Fgf1 Nr3c1 Mcc Lmnb1 Pdgfrb D18Fcr2 Emb-rs3 Grp Gnal Mtv38 Dcc D18Fcr1 Mbp
18 b b b b b b b b b b b b b b b b
12 s s s s s s s s s s s s s s s s
2 s b b b b b b b b b b b b b b b
2 b s s s s s s s s s s s s s s s
2 s s b b b b b b b b b b b b b b
5 b b s s s s s s s s s s s s s s
1 s s s b b b b b b b b b b b b b
2 b b b s s s s s s s s s s s s s
0 s s s s b b b b b b b b b b b b
1 b b b b s s s s s s s s s s s s
1 s s s s s b b b b b b b b b b b
1 b b b b b s s s s s s s s s s s
2 s s s s s s b b b b b b b b b b
1 b b b b b b s s s s s s s s s s
1 s s s s s s s b b b b b b b b b
1 b b b b b b b s s s s s s s s s
2 s s s s s s s s b b b b b b b b
0 b b b b b b b b s s s s s s s s
1 s s s s s s s s s b b b b b b b
1 b b b b b b b b b s s s s s s s
1 s s s s s s s s s s b b b b b b
1 b b b b b b b b b b s s s s s s
0 s s s s s s s s s s s b b b b b
1 b b b b b b b b b b b s s s s s
0 s s s s s s s s s s s s b b b b
1 b b b b b b b b b b b b s s s s
1 s s s s s s s s s s s s s b b b
1 b b b b b b b b b b b b b s s s
1 s s s s s s s s s s s s s s b b
0 b b b b b b b b b b b b b b s s
1 s s s s s s s s s s s s s s s b
4 b b b b b b b b b b b b b b b s
Additional Mice Typed Only for Specific Pairs of Loci
Marker 1 Marker 2 # Recombinants # Parentals
Hc18 Ttr 3 93
Ttr Map3k8 7 89
Map3k8 Fgf1 5 118
Fgf1 Hk1-rs1 1 120
Hk1-rs1 Mcc 2 109
Mcc D18Leh1 11 90
D18Leh1 Pdgfrb 1 104
Pdgfrb D18Fcr2 4 120
D18Fcr2 Emb-rs3 3 111
Emb-rs3 Grp 0 79
Grp Gnal 1 85
Gnal Mtv38 1 124
Mtv38 Dcc 1 107
Dcc D18Fcr1 0 42
D18Fcr1 Mbp 5 53
Hc18 Map3k8 0 189
Map3k8 D18Leh1 0 25
Pdgfrb Cd74 0 192
Pdgfrb Csf1r 0 175
D18Fcr2 Camk2a 0 94
D18Fcr2 D18Leh2 0 49
Hc18 Hc18 0 142
Ttr Hk1-rs1 2 30
Hk1-rs1 Map3k8 1 31
Statistics
Marker 1 Marker 2 # Recombinants Total % Recombinants Std Error
Kif5b Ttr 4 68 5.882 2.853
Ttr Apc 7 68 10.294 3.685
Apc Fgf1 3 68 4.412 2.490
Fgf1 Nr3c1 1 68 1.471 1.460
Nr3c1 Mcc 2 68 2.941 2.049
Mcc Lmnb1 3 68 4.412 2.490
Lmnb1 Pdgfrb 2 68 2.941 2.049
Pdgfrb D18Fcr2 6 192 3.125 1.256
D18Fcr2 Emb-rs3 5 182 2.747 1.212
Emb-rs3 Grp 2 147 1.361 0.955
Grp Gnal 2 154 1.299 0.912
Gnal Mtv38 2 193 1.036 0.729
Mtv38 Dcc 3 176 1.705 0.976
Dcc D18Fcr1 1 110 0.909 0.905
D18Fcr1 Mbp 10 126 7.937 2.408

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory