Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  8
• Reference
  J:62062 Bosse A, et al., Identification of a novel mouse Iroquois homeobox gene, Irx5, and chromosomal localisation of all members of the mouse Iroquois gene family. Dev Dyn. 2000 May;218(1):160-74
• ID
  MGI:1859656

Genes

Gene	Assay Type	Description
Siah1a
Irx3	Southern analysis	Irx3 probe 2
Irx5	Southern analysis	Irx5 probe
Cx3cl1

Notes

• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b> <b>/<s> <s> <s> <s>
• Strain
  (C57BL/6J x M. spretus)F1
• Male Parent
  <b> <b> <b> <b>/<b> <b> <b> <b>
• Strain
  C57BL/6J
• Mapping Panel
  Copeland-Jenkins
• Allele 1
  b from C57BL/6J
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	Siah1a	Irx3	Irx5	Cx3cl1
80	b	b	b	b
54	s	s	s	s
3	s	b	b	b
1	b	s	s	s
1	s	s	b	b
1	b	b	s	s
2	s	s	s	b
2	b	b	b	s

Additional Mice Typed Only for Specific Pairs of Loci

Marker 1	Marker 2	# Recombinants	# Parentals
Siah1a	Irx3	2	21
Irx3	Irx5	0	23
Irx5	Cx3cl1	1	22

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Siah1a	Irx3	6	167	3.593	1.440
Irx3	Irx5	2	167	1.198	0.842
Irx5	Cx3cl1	5	167	2.994	1.319