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Galnt12 Gene Detail
 Symbol
Name
ID
Galnt12
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12
MGI:2444664

Nomenclature History
Synonyms A630062B03Rik
Genetic Map
Chromosome 4
Syntenic
 
Mapping data( 1)
Sequence Map
Chr4:47104781-47135942 bp, + strand
(From VEGA annotation of NCBI Build 37)
VEGA ContigView | Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; cattle; dog, domestic; rat    (Mammalian Orthology)
Protein SuperFamily: polypeptide N-acetylgalactosaminyltransferase
TreeFam: TF352660
Sequences
Representative Sequences Length Strain/Species Flank
genomic OTTMUSG00000006777 VEGA Gene Model | MGI Sequence Detail 31162 C57BL/6J ± Kb
transcript NM_172693 RefSeq | MGI Sequence Detail 2216 C57BL/6
polypeptide Q8BGT9 UniProt | EBI | MGI Sequence Detail 576 Not Applicable
For the selected sequences
All sequences(24)
Polymorphisms SNPs within 2kb(184 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (10 annotations)
Process biological_process
Component Golgi apparatus, integral to membrane...
Function calcium ion binding, manganese ion binding...
External Resources: FuncBase
Expression cDNA source data(17)
External Resources: Allen Brain Atlas  GEO  ArrayExpress 
Molecular
reagents 		All nucleic(18) Genomic(1) cDNA(17)
Microarray probesets(1)
Other database
links
EC 2.4.1.41
Ensembl Gene Model ENSMUSG00000039774
DoTS DT.101150402, DT.528118, DT.94288093
Consensus CDS Project CCDS18158.1
UniGene 132246
DFCI TC1583017, TC1598396
NIA Mouse Gene Index U004296
Entrez Gene 230145
VEGA Gene Model OTTMUSG00000006777
International Mouse Knockout Project Status Galnt12
Protein
domains
InterPro ID Description
IPR000772 Ricin B lectin
IPR001173 Glycosyl transferase, family 2
IPR008997 Ricin B-related lectin
Graphical View of Protein Domain Structure
References
(Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, "Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs" Nature 2002;420():563-573
(Latest) J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), "The Transcriptional Landscape of the Mammalian Genome" Science 2005;309(5740):1559-1563
All references(2)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/06/2010
MGI_4.32
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