About   Help   FAQ
En1 Gene Detail
 Symbol
Name
ID
En1
engrailed 1
MGI:95389


Nomenclature History
STS D1Mit217
Synonyms En-1, engrailed-1, Mo-en.1
Genetic Map
Chromosome 1
64.1 cM, cytoband C2-qter
Detailed Genetic Map ± 1 cM
 
Mapping data( 24)

Sequence Map
Chr1:122499258-122504548 bp, + strand
(From NCBI annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; chimpanzee; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human En1 ± 2 cM)
Protein SuperFamily: homeobox protein, EN-1/EN-2 type
TreeFam: TF106461
Sequences
Representative Sequences Length Strain/Species Flank
genomic 13798 NCBI Gene Model | MGI Sequence Detail 5291 C57BL/6J ± Kb
transcript NM_010133 RefSeq | MGI Sequence Detail 2554 C57BL/6
polypeptide P09065 UniProt | EBI | MGI Sequence Detail 401 Not Applicable
For the selected sequences
All sequences(18)
Alleles
and
phenotypes
All alleles(15) : Targeted, knock-out(1) Targeted, other(14)
Mutant homozygotes usually die within 24 hours of birth. Mutants exhibit nervous system defects, including a lack of most of the colliculi, cerebellum, and the third and fourth cranial nerves in some lines. Skeletal anomalies have also been described.
Associated Human Diseases (1)   Alleles Annotated to Human Diseases (1)  
Polymorphisms RFLP(8) SNPs within 2kb(34 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (22 annotations)
Process dorsal/ventral pattern formation, embryonic forelimb morphogenesis...
Component nucleus
Function DNA binding, sequence-specific DNA binding...
External Resources: FuncBase
Expression Literature Summary: (207 records)
Data Summary: Assays (42)    Results (231)    Tissues (119)    Images (87)
Theiler Stages: 12,13,14,15,16,17,18,19,20,21,22,23,24,25,28
  Assay Type Assays   Results
      RT-PCR 4   54
      In situ reporter (knock in) 3   15
      RNA in situ 22   80
      Immunohistochemistry 9   53
      Northern blot 4   29
cDNA source data(19)
External Resources: Allen Brain Atlas  GENSAT  GEO  ArrayExpress 
Molecular
reagents
All nucleic(38) Genomic(5) cDNA(20) Primer pair(5) Other(8) Antibodies(5)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000058665
DoTS DT.40167192
Consensus CDS Project CCDS15235.1
UniGene 2657
DFCI TC1589119
NIA Mouse Gene Index U000729
Entrez Gene 13798
International Mouse Knockout Project Status En1
Protein
domains
InterPro ID Description
IPR000747 Homeobox engrailed
IPR001356 Homeobox
IPR009057 Homeodomain-like
IPR012287 Homeodomain-related
IPR015703 Homeobox protein, engrailed
IPR017970 Homeobox, conserved site
IPR019549 Homeobox engrailed, C-terminal
IPR019737 Homeobox engrailed-type, conserved site
IPR020479 Homeobox, region
Graphical View of Protein Domain Structure
References
(Earliest) J:8126 Joyner AL et al., "Expression during embryogenesis of a mouse gene with sequence homology to the Drosophila engrailed gene." Cell 1985 Nov;43(1):29-37
(Latest) J:156172 Marklund U et al., "Domain-specific control of neurogenesis achieved through patterned regulation of Notch ligand expression." Development 2010 Feb;137(3):437-45
All references(281)
Other
accession IDs
MGD-MRK-12340, MGD-MRK-9497, MGD-MRK-9499

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
02/06/2010
MGI_4.32
Web browser compatibility
The Jackson Laboratory