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Dhh Gene Detail
 Symbol
Name
ID
Dhh
desert hedgehog
MGI:94891


Nomenclature History
Genetic Map
Chromosome 15
57.4 cM
Detailed Genetic Map ± 1 cM
 
Mapping data( 3)

Sequence Map
Chr15:98723462-98728971 bp, - strand
(From NCBI annotation of NCBI Build 37)
Ensembl ContigView | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser
Mammalian
homology
human; rat    (Mammalian Orthology)
Comparative Map (Mouse/Human Dhh ± 2 cM)
Protein SuperFamily: hedgehog protein
TreeFam: TF106458
Sequences
Representative Sequences Length Strain/Species Flank
genomic 13363 NCBI Gene Model | MGI Sequence Detail 5510 C57BL/6J ± Kb
transcript NM_007857 RefSeq | MGI Sequence Detail 2381 C57BL/6
polypeptide Q61488 UniProt | EBI | MGI Sequence Detail 396 Not Applicable
For the selected sequences
All sequences(24)
Alleles
and
phenotypes
All alleles(1) : Targeted, knock-out(1)
Homozygous null mutants are male sterile, failing to produce mature spermatozoa; peripheral nerves are abnormal, with thin and disorganized perineurial sheaths. High penetrance of pseudohermaphroditism observed on some mixed backgrounds.
Associated Human Diseases (1)   Alleles Annotated to Human Diseases (1)  
Polymorphisms RFLP(1) SNPs within 2kb(19 from dbSNP Build 128)  
Gene Ontology
(GO)
classifications
All GO classifications: (19 annotations)
Process cell communication, cell cycle process...
Component extracellular region, membrane...
Function hydrolase activity, peptidase activity...
This is a GO Consortium Reference Genome Project gene.
External Resources: FuncBase
Expression Literature Summary: (47 records)
Data Summary: Assays (7)    Results (152)    Tissues (68)    Images (5)
Theiler Stages: 18,19,20,21,22,23,25,28
  Assay Type Assays   Results
      RT-PCR 5   148
      RNA in situ 1   3
      Northern blot 1   1
cDNA source data(7)
External Resources: Allen Brain Atlas  GENSAT  GEO  ArrayExpress 
Molecular
reagents
All nucleic(16) Genomic(2) cDNA(7) Primer pair(4) Other(3)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000023000
DoTS DT.101149458, DT.524934, DT.94168087, DT.99851652
Consensus CDS Project CCDS27810.1
DFCI TC1583773, TC1596210, TC1625014
NIA Mouse Gene Index U036637
Entrez Gene 13363
International Mouse Knockout Project Status Dhh
Protein
domains
InterPro ID Description
IPR000320 Hedgehog, N-terminal signaling domain
IPR001657 Peptidase C46, hedgehog protein
IPR001767 Peptidase C46, hedgehog protein, hint region
IPR003586 Hedgehog/intein hint domain, C-terminal
IPR003587 Hedgehog/intein hint, N-terminal
IPR006141 Intein splicing site
IPR009045 Hedgehog/DD-peptidase, zinc-binding motif
Graphical View of Protein Domain Structure
References
(Earliest) J:16386 Echelard Y et al., "Sonic hedgehog, a member of a family of putative signaling molecules, is implicated in the regulation of CNS polarity." Cell 1993 Dec 31;75(7):1417-30
(Latest) J:154891 Hirose Y et al., "Hedgehog signal activation coordinates proliferation and differentiation of fetal liver progenitor cells." Exp Cell Res 2009 Sep 10;315(15):2648-57
All references(66)
Other
accession IDs
MGD-MRK-8842, MGI:2146288

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
02/06/2010
MGI_4.32
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